RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 MAP1SQ66K74 1059 aaPredicted RBP6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 SCARA3Q6AZY7 606 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 CCDC84Q86UT8 332 aaPredicted RBP6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 MSL3Q8N5Y2 521 aaKnown RBP6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 BEND7Q8N7W2 519 aaPredicted RBP6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 GOLM1Q8NBJ4 401 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 KCNB2Q92953 911 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 GAL3ST3Q96A11 431 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 COG3Q96JB2 828 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 USP26Q9BXU7 913 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 MIR1-1HGQ9H1L0 117 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 CAMTA1Q9Y6Y1 1673 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 GLI3P10071 1580 aa6.61□□□□□ -1.35
TBC1D1-217ENST00000511238 SPATA31A1Q5TZJ5 1347 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 LOC100289279A0A1B0GTE1 492 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 FYB1O15117 783 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 DLGAP3O95886 979 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 PTPN11Q06124 597 aaPredicted RBP6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 SEPT6Q14141 434 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 WDR78Q5VTH9 848 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 BNC2Q6ZN30 1099 aaPredicted RBP6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 PODNQ7Z5L7 613 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 NT5C1AQ9BXI3 368 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
TBC1D1-217ENST00000511238 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 NRAPQ86VF7 1730 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 MYOM1P52179 1685 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 USP54Q70EL1 1684 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 LMO7Q8WWI1 1683 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 CGNL1Q0VF96 1302 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 KIF7Q2M1P5 1343 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 FAM221AA4D161 298 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 F13A1P00488 732 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 ELNP15502 786 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 SATB1Q01826 763 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 FAM196AQ6ZSG2 479 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 NME8Q8N427 588 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 RASGRP4Q8TDF6 673 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 GPBAR1Q8TDU6 330 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 UBASH3BQ8TF42 649 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 GATAD2BQ8WXI9 593 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 GPRASP2Q96D09 838 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 NOP53Q9NZM5 478 aaKnown RBP6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 ABCC6O95255 1503 aa6.59□□□□□ -1.35
TBC1D1-217ENST00000511238 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 ZNF862O60290 1169 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 MARCH6O60337 910 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 LETM1O95202 739 aaPredicted RBP6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 WISP1O95388 367 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 LIG1P18858 919 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 DMTNQ08495 405 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 MTA1Q13330 715 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 DUOXA2Q1HG44 320 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 IGF2-ASQ6U949 168 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 ARMCX6Q7L4S7 300 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 TCP11L2Q8N4U5 519 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 GTPBP4Q9BZE4 634 aaKnown RBP6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 UBA5Q9GZZ9 404 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 TSPYL1Q9H0U9 437 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 PNNQ9H307 717 aaKnown RBP6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 PANK3Q9H999 370 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 THRAP3Q9Y2W1 955 aaKnown RBP6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 CRB1P82279 1406 aa6.58□□□□□ -1.36
TBC1D1-217ENST00000511238 MAP3K19Q56UN5 1328 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 CILPO75339 1184 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 SELPP16109 830 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 CRKP46108 304 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 HP1BP3Q5SSJ5 553 aaPredicted RBP6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 TOM1L2Q6ZVM7 507 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 FBXO27Q8NI29 283 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 IP6K1Q92551 441 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 SCARF2Q96GP6 870 aaPredicted RBP6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 ACSBG1Q96GR2 724 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 GMLQ99445 158 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 LRRC3Q9BY71 257 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 MRVI1Q9Y6F6 885 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 BLMP54132 1417 aaPredicted RBP6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 RTL1A6NKG5 1358 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
TBC1D1-217ENST00000511238 CCER2I3L3R5 266 aa6.56□□□□□ -1.36
TBC1D1-217ENST00000511238 ZNF500O60304 480 aaPredicted RBP6.56□□□□□ -1.36
TBC1D1-217ENST00000511238 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
TBC1D1-217ENST00000511238 COL8A1P27658 744 aa6.56□□□□□ -1.36
TBC1D1-217ENST00000511238 AMPHP49418 695 aa6.56□□□□□ -1.36
TBC1D1-217ENST00000511238 APOBRQ0VD83 1088 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms