RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 MSL3Q8N5Y2 521 aaKnown RBP31.65■■■□□ 2.66
SNF8-208ENST00000510195 TINF2Q9BSI4 451 aa31.65■■■□□ 2.66
SNF8-208ENST00000510195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.65■■■□□ 2.66
SNF8-208ENST00000510195 CTDP1Q9Y5B0 961 aaPredicted RBP31.65■■■□□ 2.66
SNF8-208ENST00000510195 OAZ1P54368 228 aa31.64■■■□□ 2.66
SNF8-208ENST00000510195 FAM47AQ5JRC9 791 aa31.64■■■□□ 2.66
SNF8-208ENST00000510195 CCDC129Q6ZRS4 1044 aa31.64■■■□□ 2.66
SNF8-208ENST00000510195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.64■■■□□ 2.66
SNF8-208ENST00000510195 SLC38A10Q9HBR0 1119 aa31.64■■■□□ 2.66
SNF8-208ENST00000510195 PGK2P07205 417 aa31.63■■■□□ 2.65
SNF8-208ENST00000510195 BMP3P12645 472 aa31.63■■■□□ 2.65
SNF8-208ENST00000510195 SLFN13Q68D06 897 aa31.63■■■□□ 2.65
SNF8-208ENST00000510195 MCMDC2Q4G0Z9 681 aa31.62■■■□□ 2.65
SNF8-208ENST00000510195 PRAMEF19Q5SWL8 479 aa31.62■■■□□ 2.65
SNF8-208ENST00000510195 LRRC47Q8N1G4 583 aaKnown RBP31.62■■■□□ 2.65
SNF8-208ENST00000510195 KIFC2Q96AC6 838 aa31.62■■■□□ 2.65
SNF8-208ENST00000510195 GMCL1Q96IK5 515 aa31.62■■■□□ 2.65
SNF8-208ENST00000510195 FBXO40Q9UH90 709 aa31.62■■■□□ 2.65
SNF8-208ENST00000510195 PLXNA1Q9UIW2 1896 aa31.61■■■□□ 2.65
SNF8-208ENST00000510195 TSPY2A6NKD2 308 aa31.61■■■□□ 2.65
SNF8-208ENST00000510195 KBTBD13C9JR72 458 aa31.61■■■□□ 2.65
SNF8-208ENST00000510195 SYN1P17600 705 aa31.61■■■□□ 2.65
SNF8-208ENST00000510195 PLA2G6O60733 806 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 FGRP09769 529 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 GJC2Q5T442 439 aaPredicted RBP31.6■■■□□ 2.65
SNF8-208ENST00000510195 VPS53Q5VIR6 699 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 CHURC1Q8WUH1 139 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 DDX11Q96FC9 970 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 LNPKQ9C0E8 428 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 RIPK3Q9Y572 518 aa31.6■■■□□ 2.65
SNF8-208ENST00000510195 ORC4O43929 436 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 MAGEA10P43363 369 aaPredicted RBP31.59■■■□□ 2.65
SNF8-208ENST00000510195 STAT2P52630 851 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 CTDSPL2Q05D32 466 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 FAM160B2Q86V87 743 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 CPXCR1Q8N123 301 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 CHST13Q8NET6 341 aa31.59■■■□□ 2.65
SNF8-208ENST00000510195 ZMYM6O95789 1325 aa31.58■■■□□ 2.65
SNF8-208ENST00000510195 DNAJC25-GNG10A0A024R161 153 aa31.58■■■□□ 2.65
SNF8-208ENST00000510195 ZNF467Q7Z7K2 595 aaPredicted RBP31.58■■■□□ 2.65
SNF8-208ENST00000510195 STX8Q9UNK0 236 aa31.58■■■□□ 2.65
SNF8-208ENST00000510195 CNPY2Q9Y2B0 182 aa31.58■■■□□ 2.65
SNF8-208ENST00000510195 SYNGAP1Q96PV0 1343 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 TMEM232C9JQI7 657 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 RARBP10826 455 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 SLC1A4P43007 532 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 NOVP48745 357 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 MAMDC4Q6UXC1 1216 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 STAG1Q8WVM7 1258 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 FAM227BQ96M60 508 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 OSBPL3Q9H4L5 887 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 RAVER2Q9HCJ3 691 aaKnown RBP31.57■■■□□ 2.64
SNF8-208ENST00000510195 IL17RBQ9NRM6 502 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 SMCHD1A6NHR9 2005 aa31.57■■■□□ 2.64
SNF8-208ENST00000510195 A0A0D9SFI3 127 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 TRIM6-TRIM34B2RNG4 842 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 FGAP02671 866 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 LRRC41Q15345 812 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 ANO1Q5XXA6 986 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 CHD1LQ86WJ1 897 aa31.56■■■□□ 2.64
SNF8-208ENST00000510195 RANBP6O60518 1105 aaKnown RBP31.55■■■□□ 2.64
SNF8-208ENST00000510195 ZNF865P0CJ78 1059 aaPredicted RBP31.55■■■□□ 2.64
SNF8-208ENST00000510195 AKR1A1P14550 325 aa31.55■■■□□ 2.64
SNF8-208ENST00000510195 NUCB1Q02818 461 aa31.55■■■□□ 2.64
SNF8-208ENST00000510195 HSPD1P10809 573 aaKnown RBP31.54■■■□□ 2.64
SNF8-208ENST00000510195 ATN1P54259 1190 aaPredicted RBP31.54■■■□□ 2.64
SNF8-208ENST00000510195 MFAP1P55081 439 aaKnown RBP31.54■■■□□ 2.64
SNF8-208ENST00000510195 C1orf53Q5VUE5 145 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 RCSD1Q6JBY9 416 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 SLC39A5Q6ZMH5 540 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 TDHQ8IZJ6 230 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 ANKRD35Q8N283 1001 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 XPNPEP3Q9NQH7 507 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 INCENPQ9NQS7 918 aa31.54■■■□□ 2.64
SNF8-208ENST00000510195 PCP11498 1178 aaKnown RBP31.53■■■□□ 2.64
SNF8-208ENST00000510195 MCCP23508 829 aa31.53■■■□□ 2.64
SNF8-208ENST00000510195 B4GALNT3Q6L9W6 998 aa31.53■■■□□ 2.64
SNF8-208ENST00000510195 RNF180Q86T96 592 aa31.53■■■□□ 2.64
SNF8-208ENST00000510195 UBE2OQ9C0C9 1292 aaKnown RBP31.53■■■□□ 2.64
SNF8-208ENST00000510195 SLC4A3P48751 1232 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 RTP1P59025 263 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 NMIQ13287 307 aaPredicted RBP31.52■■■□□ 2.64
SNF8-208ENST00000510195 SNX17Q15036 470 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 TKFCQ3LXA3 575 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 LRIT3Q3SXY7 679 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 GPR153Q6NV75 609 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 PLEKHM2Q8IWE5 1019 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 RILPL2Q969X0 211 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 TCP11L1Q9NUJ3 509 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 PRKAG2Q9UGJ0 569 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 TACC3Q9Y6A5 838 aa31.52■■■□□ 2.64
SNF8-208ENST00000510195 CCDC171Q6TFL3 1326 aa31.51■■■□□ 2.64
SNF8-208ENST00000510195 IGHDP01880 384 aa31.51■■■□□ 2.63
SNF8-208ENST00000510195 TAL1P17542 331 aaPredicted RBP31.51■■■□□ 2.63
SNF8-208ENST00000510195 IKQ13123 557 aaPredicted RBP31.51■■■□□ 2.63
SNF8-208ENST00000510195 ISY1Q9ULR0 285 aaKnown RBP31.51■■■□□ 2.63
SNF8-208ENST00000510195 PHF24Q9UPV7 400 aa31.51■■■□□ 2.63
SNF8-208ENST00000510195 NMT2O60551 498 aa31.5■■■□□ 2.63
SNF8-208ENST00000510195 SNAI1O95863 264 aaPredicted RBP31.5■■■□□ 2.63
SNF8-208ENST00000510195 MYCNP04198 464 aaPredicted RBP31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms