RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 DIAPH2O60879 1101 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 ATP2C2O75185 946 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 KIF4AO95239 1232 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 KCNA4P22459 653 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 PTPAQ15257 358 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 CCDC57Q2TAC2 916 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 GNPTABQ3T906 1256 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 CDKAL1Q5VV42 579 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 RBM41Q96IZ5 413 aaKnown RBP11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 MOV10L1Q9BXT6 1211 aaKnown RBP11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 OSBPL1AQ9BXW6 950 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 RFX7Q2KHR2 1363 aa11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.62
PDGFRA-207ENST00000509092 RASSF10A6NK89 507 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 LRRC23Q53EV4 343 aaPredicted RBP11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 GKAP1Q5VSY0 366 aaPredicted RBP11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 NME9Q86XW9 330 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 AGAP11Q8TF27 550 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 NECTIN2Q92692 538 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 DTNBP1Q96EV8 351 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKRD27Q96NW4 1050 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 HINFPQ9BQA5 517 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 BLOC1S6Q9UL45 172 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 G3BP2Q9UN86 482 aaKnown RBP11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.63
PDGFRA-207ENST00000509092 ABLIM1O14639 778 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 ABL2P42684 1182 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 VAV2P52735 878 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 HERVK_113P62684 666 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 CUL3Q13618 768 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 ZNF827Q17R98 1081 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 KRT86O43790 486 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 PAEPP09466 180 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 CLTAP09496 248 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 CCND1P24385 295 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 PAK2Q13177 524 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 ZNF268Q14587 947 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 HAUS3Q68CZ6 603 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 CREG2Q8IUH2 290 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 ZNF232Q9UNY5 417 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 SLC12A4Q9UP95 1085 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 SYNRGQ9UMZ2 1314 aa11.14□□□□□ -0.63
PDGFRA-207ENST00000509092 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 CCT8L1PA6NM43 557 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 NPTXRO95502 500 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 IDEP14735 1019 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 KRT9P35527 623 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 CCNG1P51959 295 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 SLC7A5Q01650 507 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 ZMYM1Q5SVZ6 1142 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 SPATA4Q8NEY3 305 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 EAF2Q96CJ1 260 aaPredicted RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 BICD1Q96G01 975 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 COG3Q96JB2 828 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 CHP1Q99653 195 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 SLC12A6Q9UHW9 1150 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 ZNF609O15014 1411 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 C4AP0C0L4 1744 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 C4BP0C0L5 1744 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 LRRD1A4D1F6 860 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 TRIM37O94972 964 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 EIF2S2P20042 333 aaKnown RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 CNGA1P29973 690 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 KRT83P78385 493 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 TAF1DQ9H5J8 278 aaPredicted RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 TMBIM4Q9HC24 238 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
PDGFRA-207ENST00000509092 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 GOLGA6L10A6NI86 522 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 ECEL1O95672 775 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 ALDH3A1P30838 453 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 HPDP32754 393 aaPredicted RBP11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 KIF5BP33176 963 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 MXRA7P84157 204 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 USP4Q13107 963 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 IFT20Q8IY31 132 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms