RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 MIGA1Q8NAN2 632 aa9.43□□□□□ -0.9
CCSER1-207ENST00000508550 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
CCSER1-207ENST00000508550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCSER1-207ENST00000508550 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
CCSER1-207ENST00000508550 STK36Q9NRP7 1315 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 GPR37L1O60883 481 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 CPA1P15085 419 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 NOVP48745 357 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
CCSER1-207ENST00000508550 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 CCDC83Q8IWF9 413 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 NSUN7Q8NE18 718 aaKnown RBP9.42□□□□□ -0.9
CCSER1-207ENST00000508550 WASF1Q92558 559 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 ZDHHC15Q96MV8 337 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 RBM28Q9NW13 759 aaKnown RBP9.42□□□□□ -0.9
CCSER1-207ENST00000508550 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCSER1-207ENST00000508550 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 IQSEC3Q9UPP2 1182 aaPredicted RBP9.42□□□□□ -0.9
CCSER1-207ENST00000508550 A0A1B0GUL6 1792 aa9.42□□□□□ -0.9
CCSER1-207ENST00000508550 CACNA1SQ13698 1873 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 CDC14CA4D256 554 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 USP17L21D6R901 530 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 PRKAB2O43741 272 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 DDAH1O94760 285 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 MBD3O95983 291 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 KCNA3P22001 575 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 RHBDL3P58872 404 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 HAND2P61296 217 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 GTF2IP78347 998 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 ST3GAL1Q11201 340 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 KLHL40Q2TBA0 621 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 TTC6Q86TZ1 520 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 TEKT1Q969V4 418 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 UBAC1Q9BSL1 405 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 IDI2Q9BXS1 227 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 EHD4Q9H223 541 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
CCSER1-207ENST00000508550 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
CCSER1-207ENST00000508550 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 SLC12A7Q9Y666 1083 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 TIAM2Q8IVF5 1701 aa9.41□□□□□ -0.9
CCSER1-207ENST00000508550 ELP1O95163 1332 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 CPLX1O14810 134 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 IFIT3O14879 490 aaKnown RBP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 ZBTB43O43298 467 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 ARHGEF15O94989 841 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 LARGE1O95461 756 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 F13A1P00488 732 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 IFNAR1P17181 557 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 BTDP43251 543 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 USP5P45974 858 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 METAP2P50579 478 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 DYNLL1P63167 89 aaKnown RBP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 WTAPQ15007 396 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 SEC23AQ15436 765 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 TMEM67Q5HYA8 995 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 DACT2Q5SW24 774 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 FKBP1CQ5VVH2 108 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 C16orf86Q6ZW13 317 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 METTL16Q86W50 562 aaKnown RBP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 SDR42E1Q8WUS8 393 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 SCAND2PQ9GZW5 306 aaPredicted RBP9.4□□□□□ -0.9
CCSER1-207ENST00000508550 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
CCSER1-207ENST00000508550 NEDD4P46934 1319 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 A0A1W2PRU2 124 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 B4E1Z4 1266 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
CCSER1-207ENST00000508550 GNAQP50148 359 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 CYB5R4Q7L1T6 521 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 TEX11Q8IYF3 940 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 AGBL3Q8NEM8 1001 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 LZTS2Q9BRK4 669 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 MCM9Q9NXL9 1143 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 DAGLAQ9Y4D2 1042 aa9.39□□□□□ -0.91
CCSER1-207ENST00000508550 MORC2Q9Y6X9 1032 aaPredicted RBP9.39□□□□□ -0.91
CCSER1-207ENST00000508550 COL2A1P02458 1487 aaPredicted RBP9.39□□□□□ -0.91
CCSER1-207ENST00000508550 PLIN4Q96Q06 1357 aa9.38□□□□□ -0.91
CCSER1-207ENST00000508550 MAST2Q6P0Q8 1798 aa9.38□□□□□ -0.91
CCSER1-207ENST00000508550 PTPDC1A2A3K4 754 aa9.38□□□□□ -0.91
CCSER1-207ENST00000508550 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms