RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 FCER1AP12319 257 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 NOVP48745 357 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 PDE4BQ07343 736 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 ANO1Q5XXA6 986 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 MMP19Q99542 508 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 OSBPL3Q9H4L5 887 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 ZMYND8Q9ULU4 1186 aaPredicted RBP19.14■□□□□ 0.65
HOXC4-203ENST00000507650 SYNPO2Q9UMS6 1093 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 NR2E3Q9Y5X4 410 aa19.14■□□□□ 0.65
HOXC4-203ENST00000507650 FGAP02671 866 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 HSPD1P10809 573 aaKnown RBP19.13■□□□□ 0.65
HOXC4-203ENST00000507650 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
HOXC4-203ENST00000507650 CNGA1P29973 690 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 MCMDC2Q4G0Z9 681 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
HOXC4-203ENST00000507650 PRPF38AQ8NAV1 312 aaKnown RBP19.13■□□□□ 0.65
HOXC4-203ENST00000507650 FGD4Q96M96 766 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 SLC38A10Q9HBR0 1119 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
HOXC4-203ENST00000507650 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
HOXC4-203ENST00000507650 ZNF536O15090 1300 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 DNAJC25-GNG10A0A024R161 153 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 ATP2A1O14983 1001 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 PDE4AP27815 886 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 KIFC2Q96AC6 838 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
HOXC4-203ENST00000507650 RAVER2Q9HCJ3 691 aaKnown RBP19.12■□□□□ 0.65
HOXC4-203ENST00000507650 ZMYM6O95789 1325 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 CCDC171Q6TFL3 1326 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 ORC4O43929 436 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 SYN1P17600 705 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 SDSP20132 328 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 TBC1D10CQ8IV04 446 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 CPXCR1Q8N123 301 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 RILPL2Q969X0 211 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 GDF15Q99988 308 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 IL25Q9H293 177 aa19.11■□□□□ 0.65
HOXC4-203ENST00000507650 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 SEPT4O43236 478 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 SLC3A2P08195 630 aaKnown RBP19.1■□□□□ 0.65
HOXC4-203ENST00000507650 BMP3P12645 472 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 HAND2P61296 217 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 GJC2Q5T442 439 aaPredicted RBP19.1■□□□□ 0.65
HOXC4-203ENST00000507650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.1■□□□□ 0.65
HOXC4-203ENST00000507650 LENG1Q96BZ8 264 aaPredicted RBP19.1■□□□□ 0.65
HOXC4-203ENST00000507650 GMCL1Q96IK5 515 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 FEM1BQ9UK73 627 aa19.1■□□□□ 0.65
HOXC4-203ENST00000507650 TSPY2A6NKD2 308 aa19.09■□□□□ 0.65
HOXC4-203ENST00000507650 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
HOXC4-203ENST00000507650 SOX1O00570 391 aaPredicted RBP19.09■□□□□ 0.65
HOXC4-203ENST00000507650 ZNF865P0CJ78 1059 aaPredicted RBP19.09■□□□□ 0.65
HOXC4-203ENST00000507650 MCCP23508 829 aa19.09■□□□□ 0.65
HOXC4-203ENST00000507650 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
HOXC4-203ENST00000507650 TICAM2Q86XR7 235 aa19.09■□□□□ 0.65
HOXC4-203ENST00000507650 TINF2Q9BSI4 451 aa19.09■□□□□ 0.65
HOXC4-203ENST00000507650 DIS3Q9Y2L1 958 aaKnown RBP19.09■□□□□ 0.65
HOXC4-203ENST00000507650 LAMA2P24043 3122 aaKnown RBP19.09■□□□□ 0.65
HOXC4-203ENST00000507650 DNM1LO00429 736 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 RANBP6O60518 1105 aaKnown RBP19.08■□□□□ 0.64
HOXC4-203ENST00000507650 MSCO60682 206 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 SNAP25P60880 206 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 KCTD2Q14681 263 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 KCTD1Q719H9 257 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 SENP6Q9GZR1 1112 aaPredicted RBP19.08■□□□□ 0.64
HOXC4-203ENST00000507650 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
HOXC4-203ENST00000507650 NEDD4P46934 1319 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 ADCY6O43306 1168 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 SNAI1O95863 264 aaPredicted RBP19.07■□□□□ 0.64
HOXC4-203ENST00000507650 COPB2P35606 906 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 SLC4A3P48751 1232 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 RCSD1Q6JBY9 416 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 AGBL1Q96MI9 1066 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 SLC5A4Q9NY91 659 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 MYH6P13533 1939 aa19.07■□□□□ 0.64
HOXC4-203ENST00000507650 ASTN1O14525 1302 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 ZBED4O75132 1171 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
HOXC4-203ENST00000507650 SLC1A4P43007 532 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 MAGEA10P43363 369 aaPredicted RBP19.06■□□□□ 0.64
HOXC4-203ENST00000507650 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
HOXC4-203ENST00000507650 LRRC41Q15345 812 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
HOXC4-203ENST00000507650 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 STAG1Q8WVM7 1258 aa19.06■□□□□ 0.64
HOXC4-203ENST00000507650 STAT2P52630 851 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 OAZ1P54368 228 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
HOXC4-203ENST00000507650 MAMDC4Q6UXC1 1216 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 TMEM47Q9BQJ4 181 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 HOMER2Q9NSB8 354 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 PRR12Q9ULL5 1215 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
HOXC4-203ENST00000507650 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
HOXC4-203ENST00000507650 PLA2G6O60733 806 aa19.04■□□□□ 0.64
HOXC4-203ENST00000507650 IRX5P78411 483 aaPredicted RBP19.04■□□□□ 0.64
HOXC4-203ENST00000507650 CNTN2Q02246 1040 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms