RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 SLC16A2P36021 539 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 KAT14Q9H8E8 782 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 SUFUQ9UMX1 484 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 ANKRD1Q15327 319 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 TMEM87BQ96K49 555 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 PTGS1P23219 599 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 SATB1Q01826 763 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
ITGA3-208ENST00000506437 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
ITGA3-208ENST00000506437 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 SLC26A6Q9BXS9 759 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
ITGA3-208ENST00000506437 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 PFKFB2O60825 505 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 TNNI2P48788 182 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 CUL4AQ13619 759 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
ITGA3-208ENST00000506437 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 ROBO3Q96MS0 1386 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 MCM2P49736 904 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 TROAPQ12815 778 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 FANCBQ8NB91 859 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
ITGA3-208ENST00000506437 ICA1Q05084 483 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 RTN1Q16799 776 aa13.09□□□□□ -0.31
ITGA3-208ENST00000506437 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
ITGA3-208ENST00000506437 ZSCAN26Q16670 478 aa13.08□□□□□ -0.32
ITGA3-208ENST00000506437 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.32
ITGA3-208ENST00000506437 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
ITGA3-208ENST00000506437 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.32
ITGA3-208ENST00000506437 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
ITGA3-208ENST00000506437 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SYT1P21579 422 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 LIFRP42702 1097 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 TATDN1Q6P1N9 297 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SGMS1Q86VZ5 419 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 RRP15Q9Y3B9 282 aaKnown RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
ITGA3-208ENST00000506437 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
ITGA3-208ENST00000506437 PHF20L1A8MW92 1017 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 PEX10O60683 326 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
ITGA3-208ENST00000506437 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 EHD4Q9H223 541 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 TTLL1O95922 423 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 CAP2P40123 477 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 SRLQ86TD4 932 aa13.06□□□□□ -0.32
ITGA3-208ENST00000506437 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
ITGA3-208ENST00000506437 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 NTRK3Q16288 839 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
ITGA3-208ENST00000506437 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 CYTH3O43739 400 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms