RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 SEPT4O43236 478 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 MSCO60682 206 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 ZBED4O75132 1171 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 FGRP09769 529 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 BMP3P12645 472 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 NUCB1Q02818 461 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 KCTD2Q14681 263 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 SYNPO2Q9UMS6 1093 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
CDC42SE2-209ENST00000506419 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 HSPD1P10809 573 aaKnown RBP17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 MCCP23508 829 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 NOVP48745 357 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 SLC4A3P48751 1232 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 MYH8P13535 1937 aa17.09■□□□□ 0.33
CDC42SE2-209ENST00000506419 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 TMEM232C9JQI7 657 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 COPB2P35606 906 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 SUPT16HQ9Y5B9 1047 aaKnown RBP17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 ALPK3Q96L96 1907 aa17.08■□□□□ 0.32
CDC42SE2-209ENST00000506419 DNAJC25-GNG10A0A024R161 153 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 DNM1LO00429 736 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 ORC4O43929 436 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 SDSP20132 328 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 BMP8BP34820 402 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 ATN1P54259 1190 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 RASGRP2Q7LDG7 609 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 ARRDC4Q8NCT1 418 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 GMCL1Q96IK5 515 aa17.07■□□□□ 0.32
CDC42SE2-209ENST00000506419 SOX1O00570 391 aaPredicted RBP17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 LRRC41Q15345 812 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 DDX11Q96FC9 970 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 FGD4Q96M96 766 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
CDC42SE2-209ENST00000506419 PARP14Q460N5 1801 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 ZNF536O15090 1300 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 SLC1A4P43007 532 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 SNAP25P60880 206 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 HAND2P61296 217 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 ZNF236Q9UL36 1845 aa17.05■□□□□ 0.32
CDC42SE2-209ENST00000506419 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 PLA2G6O60733 806 aa17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 ADCYAP1R1P41586 468 aa17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 OAZ1P54368 228 aa17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
CDC42SE2-209ENST00000506419 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 CCDC171Q6TFL3 1326 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 PGK1P00558 417 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 STAT2P52630 851 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 RTP1P59025 263 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 FAM160B2Q86V87 743 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 PRR12Q9ULL5 1215 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 ISY1Q9ULR0 285 aaKnown RBP17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
CDC42SE2-209ENST00000506419 ZNFX1Q9P2E3 1918 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 FDX1P10109 184 aa17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 CNTN2Q02246 1040 aa17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 MSL3Q8N5Y2 521 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms