RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 TIMP1P01033 207 aa20.28■□□□□ 0.84
DDR1-257ENST00000505534 DNAJB2P25686 324 aa20.28■□□□□ 0.84
DDR1-257ENST00000505534 GRIN2CQ14957 1233 aa20.28■□□□□ 0.84
DDR1-257ENST00000505534 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
DDR1-257ENST00000505534 LENG1Q96BZ8 264 aaPredicted RBP20.28■□□□□ 0.84
DDR1-257ENST00000505534 SYNRGQ9UMZ2 1314 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 GREB1LQ9C091 1923 aaPredicted RBP20.27■□□□□ 0.84
DDR1-257ENST00000505534 RAD21O60216 631 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 HMMRO75330 724 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 ATP5JP18859 108 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 UBE3CQ15386 1083 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 KCNA10Q16322 511 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 CCSAPQ6IQ19 270 aaPredicted RBP20.27■□□□□ 0.84
DDR1-257ENST00000505534 MAMDC4Q6UXC1 1216 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 SLC4A4Q9Y6R1 1079 aa20.27■□□□□ 0.84
DDR1-257ENST00000505534 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.83
DDR1-257ENST00000505534 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 DUSP11O75319 330 aaKnown RBP20.26■□□□□ 0.83
DDR1-257ENST00000505534 SNAI1O95863 264 aaPredicted RBP20.26■□□□□ 0.83
DDR1-257ENST00000505534 CTR9Q6PD62 1173 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
DDR1-257ENST00000505534 HAUS7Q99871 368 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 SLF1Q9BQI6 1058 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 ZNF576Q9H609 170 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 TBX21Q9UL17 535 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 ELP1O95163 1332 aa20.26■□□□□ 0.83
DDR1-257ENST00000505534 DNAJC25-GNG10A0A024R161 153 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 CST5P28325 142 aaPredicted RBP20.25■□□□□ 0.83
DDR1-257ENST00000505534 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
DDR1-257ENST00000505534 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 CCDC174Q6PII3 467 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 ZNF467Q7Z7K2 595 aaPredicted RBP20.25■□□□□ 0.83
DDR1-257ENST00000505534 TIFAQ96CG3 184 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 GLT1D1Q96MS3 346 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.25■□□□□ 0.83
DDR1-257ENST00000505534 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
DDR1-257ENST00000505534 ZHX1Q9UKY1 873 aaPredicted RBP20.25■□□□□ 0.83
DDR1-257ENST00000505534 MS4A1P11836 297 aa20.24■□□□□ 0.83
DDR1-257ENST00000505534 CDK7P50613 346 aa20.24■□□□□ 0.83
DDR1-257ENST00000505534 PPIGQ13427 754 aaKnown RBP eCLIP20.24■□□□□ 0.832e-11■■■□□ 16.7
DDR1-257ENST00000505534 TJAP1Q5JTD0 557 aa20.24■□□□□ 0.83
DDR1-257ENST00000505534 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
DDR1-257ENST00000505534 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
DDR1-257ENST00000505534 PCSK9Q8NBP7 692 aaKnown RBP20.24■□□□□ 0.83
DDR1-257ENST00000505534 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.24■□□□□ 0.833e-7■□□□□ 11.3
DDR1-257ENST00000505534 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
DDR1-257ENST00000505534 F5H6K3 240 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 ATP2A1O14983 1001 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 CHGBP05060 677 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 KLRC3Q07444 240 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 ACVR2BQ13705 512 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 SIRT2Q8IXJ6 389 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
DDR1-257ENST00000505534 SPC25Q9HBM1 224 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 RIPK3Q9Y572 518 aa20.23■□□□□ 0.83
DDR1-257ENST00000505534 MYADML2A6NDP7 307 aa20.22■□□□□ 0.83
DDR1-257ENST00000505534 C6orf222P0C671 652 aaPredicted RBP20.22■□□□□ 0.83
DDR1-257ENST00000505534 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
DDR1-257ENST00000505534 TMEM240Q5SV17 173 aa20.22■□□□□ 0.83
DDR1-257ENST00000505534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDR1-257ENST00000505534 PUS7LQ9H0K6 701 aaKnown RBP20.22■□□□□ 0.83
DDR1-257ENST00000505534 ABHD16BQ9H3Z7 469 aa20.22■□□□□ 0.83
DDR1-257ENST00000505534 ZBED4O75132 1171 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 NDUFB10O96000 172 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 ASGR1P07306 291 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 GJA9P57773 515 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 RASIP1Q5U651 963 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 TMEM199Q8N511 208 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 VTI1AQ96AJ9 217 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 GAS2L1Q99501 681 aaPredicted RBP20.21■□□□□ 0.83
DDR1-257ENST00000505534 UPF3AQ9H1J1 476 aaKnown RBP20.21■□□□□ 0.83
DDR1-257ENST00000505534 MKNK2Q9HBH9 465 aa20.21■□□□□ 0.83
DDR1-257ENST00000505534 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.21■□□□□ 0.83
DDR1-257ENST00000505534 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
DDR1-257ENST00000505534 MUC3AQ02505 3323 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 NCOR1O75376 2440 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 A0A0U1RQG5 324 aaPredicted RBP20.2■□□□□ 0.82
DDR1-257ENST00000505534 ARVCFO00192 962 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 RASA1P20936 1047 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 CCDC129Q6ZRS4 1044 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 C16orf59Q7L2K0 433 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 ZBTB40Q9NUA8 1239 aa20.2■□□□□ 0.82
DDR1-257ENST00000505534 TNFRSF10AO00220 468 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
DDR1-257ENST00000505534 CSF2RAP15509 400 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 SLC4A3P48751 1232 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 IRX5P78411 483 aaPredicted RBP20.19■□□□□ 0.82
DDR1-257ENST00000505534 CCDC144BQ3MJ40 725 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 GNASQ5JWF2 1037 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 GIMAP6Q6P9H5 292 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 PSRC1Q6PGN9 363 aaPredicted RBP20.19■□□□□ 0.82
DDR1-257ENST00000505534 ANKRD35Q8N283 1001 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 CHST13Q8NET6 341 aa20.19■□□□□ 0.82
DDR1-257ENST00000505534 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms