RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 SMCHD1A6NHR9 2005 aa14.56□□□□□ -0.08
SNHG4-202ENST00000505522 ATP2A1O14983 1001 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 FOXP2O15409 715 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 RARBP10826 455 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 MX1P20591 662 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 SNX17Q15036 470 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 TRIM60Q495X7 471 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 LENG1Q96BZ8 264 aaPredicted RBP14.55□□□□□ -0.08
SNHG4-202ENST00000505522 XPNPEP3Q9NQH7 507 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 PRKAG2Q9UGJ0 569 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
SNHG4-202ENST00000505522 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 ZBED4O75132 1171 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
SNHG4-202ENST00000505522 TTLL1O95922 423 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 PGK1P00558 417 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 TSPY3P0CV98 308 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 TSPY8P0CW00 308 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 RRP1P56182 461 aaKnown RBP14.54□□□□□ -0.08
SNHG4-202ENST00000505522 PDE4BQ07343 736 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 PPARAQ07869 468 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 SH3RF1Q7Z6J0 888 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 GMCL1P1Q8NEA9 526 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 NEDD1Q8NHV4 660 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 NAPBQ9H115 298 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 SLC38A10Q9HBR0 1119 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 RAVER2Q9HCJ3 691 aaKnown RBP14.54□□□□□ -0.08
SNHG4-202ENST00000505522 PRDM5Q9NQX1 630 aaPredicted RBP14.54□□□□□ -0.08
SNHG4-202ENST00000505522 PHF24Q9UPV7 400 aa14.54□□□□□ -0.08
SNHG4-202ENST00000505522 AKR1A1P14550 325 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 TFAP4Q01664 338 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 C1orf53Q5VUE5 145 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 SLFN13Q68D06 897 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 PDLIM7Q9NR12 457 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 MTMR10Q9NXD2 777 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
SNHG4-202ENST00000505522 CTDP1Q9Y5B0 961 aaPredicted RBP14.53□□□□□ -0.08
SNHG4-202ENST00000505522 SYNGAP1Q96PV0 1343 aa14.52□□□□□ -0.08
SNHG4-202ENST00000505522 TRIM43BA6NCK2 446 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 ADAMTS4O75173 837 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 SLC3A2P08195 630 aaKnown RBP14.52□□□□□ -0.09
SNHG4-202ENST00000505522 BMP3P12645 472 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 TLE2Q04725 743 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 MAMDC4Q6UXC1 1216 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNHG4-202ENST00000505522 RNF180Q86T96 592 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 MSL3Q8N5Y2 521 aaKnown RBP14.52□□□□□ -0.09
SNHG4-202ENST00000505522 SLC17A8Q8NDX2 589 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 BADQ92934 168 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 TRIM43Q96BQ3 446 aaPredicted RBP14.52□□□□□ -0.09
SNHG4-202ENST00000505522 CHMP4CQ96CF2 233 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 CRBNQ96SW2 442 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 INCENPQ9NQS7 918 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
SNHG4-202ENST00000505522 SYNRGQ9UMZ2 1314 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 A0A1W2PQ45 241 aaPredicted RBP14.51□□□□□ -0.09
SNHG4-202ENST00000505522 A0A1W2PQY0 241 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 TMEM232C9JQI7 657 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 SHHQ15465 462 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 ANKRD45Q5TZF3 282 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 VPS53Q5VIR6 699 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 FGD4Q96M96 766 aa14.51□□□□□ -0.09
SNHG4-202ENST00000505522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
SNHG4-202ENST00000505522 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ADCY6O43306 1168 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 NMT2O60551 498 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ITGB8P26012 769 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 OAZ1P54368 228 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 C9orf50Q5SZB4 431 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ZNF467Q7Z7K2 595 aaPredicted RBP14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 CHST13Q8NET6 341 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 GMCL1Q96IK5 515 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 IL17RBQ9NRM6 502 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 HOMER2Q9NSB8 354 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.5□□□□□ -0.09
SNHG4-202ENST00000505522 FBXO40Q9UH90 709 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
SNHG4-202ENST00000505522 FAM184BQ9ULE4 1060 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ISY1Q9ULR0 285 aaKnown RBP14.5□□□□□ -0.09
SNHG4-202ENST00000505522 STXBP5LQ9Y2K9 1186 aa14.5□□□□□ -0.09
SNHG4-202ENST00000505522 ZNF536O15090 1300 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 MYADML2A6NDP7 307 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 MCCP23508 829 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 STAT2P52630 851 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 IRX5P78411 483 aaPredicted RBP14.49□□□□□ -0.09
SNHG4-202ENST00000505522 ACVR2BQ13705 512 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 CCSAPQ6IQ19 270 aaPredicted RBP14.49□□□□□ -0.09
SNHG4-202ENST00000505522 KCTD1Q719H9 257 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 RASGRP2Q7LDG7 609 aa14.49□□□□□ -0.09
SNHG4-202ENST00000505522 KLHDC9Q8NEP7 349 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms