RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
COL1A1-210ENST00000504289 ENOX1Q8TC92 643 aaKnown RBP11.14□□□□□ -0.63
COL1A1-210ENST00000504289 DCAF4Q8WV16 495 aa11.14□□□□□ -0.63
COL1A1-210ENST00000504289 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
COL1A1-210ENST00000504289 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
COL1A1-210ENST00000504289 KANSL2Q9H9L4 492 aa11.14□□□□□ -0.63
COL1A1-210ENST00000504289 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
COL1A1-210ENST00000504289 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
COL1A1-210ENST00000504289 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 SLC26A4O43511 780 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 NRDCO43847 1150 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 AKR1B1P15121 316 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 KCNJ6P48051 423 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 TRAF1Q13077 416 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
COL1A1-210ENST00000504289 PICALMQ13492 652 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 NOLC1Q14978 699 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL1A1-210ENST00000504289 MSL1Q68DK7 614 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 CCDC186Q7Z3E2 898 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 TTLL6Q8N841 843 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 CCDC150Q8NCX0 1101 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 MTMR8Q96EF0 704 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 DBNDD1Q9H9R9 158 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-210ENST00000504289 KCND1Q9NSA2 647 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 MAN1B1Q9UKM7 699 aa11.13□□□□□ -0.63
COL1A1-210ENST00000504289 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 PSME4Q14997 1843 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 VWA3AA6NCI4 1184 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 F8W031 263 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 BIN1O00499 593 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 SCNN1DP51172 638 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 GRIN1Q05586 938 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 DPYDQ12882 1025 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 EZH2Q15910 746 aaKnown RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 E2F4Q16254 413 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 NEK8Q86SG6 692 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 SPC24Q8NBT2 197 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 PAGE5Q96GU1 130 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
COL1A1-210ENST00000504289 TTC12Q9H892 705 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 HERC5Q9UII4 1024 aaKnown RBP11.12□□□□□ -0.63
COL1A1-210ENST00000504289 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 TPM2P07951 284 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 VEGFAP15692 232 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 PTGS1P23219 599 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 MCM7P33993 719 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 PPP1R2P41236 205 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 ADCY7P51828 1080 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 MRPL12P52815 198 aaKnown RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 FANCCQ00597 558 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 LRRC8AQ8IWT6 810 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 MTMR14Q8NCE2 650 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 GMCL1P1Q8NEA9 526 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 ERCC4Q92889 916 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-210ENST00000504289 DHX58Q96C10 678 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 EPSTI1Q96J88 318 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 PRIMPOLQ96LW4 560 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 PIGSQ96S52 555 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 FAM198AQ9UFP1 575 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
COL1A1-210ENST00000504289 ZBTB5O15062 677 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 PPIP5K2O43314 1243 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 TUBB4AP04350 444 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
COL1A1-210ENST00000504289 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 CHRNA5P30532 468 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 UBA7P41226 1012 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 NFIAQ12857 509 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 PDIA5Q14554 519 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 KCNB1Q14721 858 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 PPP4R3AQ6IN85 833 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 USP49Q70CQ1 688 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 AGBL3Q8NEM8 1001 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 GMCL1Q96IK5 515 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
COL1A1-210ENST00000504289 A0A087X0B3 334 aa11.09□□□□□ -0.63
COL1A1-210ENST00000504289 WNT7AO00755 349 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms