RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ZNF189O75820 626 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 UBL4AP11441 157 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 RXRBP28702 533 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MARCKSP29966 332 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 HOXC9P31274 260 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MNAT1P51948 309 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 LRP8Q14114 963 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 TDRD12Q587J7 1177 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 IQCEQ6IPM2 695 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 RCSD1Q6JBY9 416 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SESTD1Q86VW0 696 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 FMNL3Q8IVF7 1028 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CCDC12Q8WUD4 166 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NELL2Q99435 816 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ANO10Q9NW15 660 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 TTLL3Q9Y4R7 772 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 BTAF1O14981 1849 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 KIAA0232Q92628 1395 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 HIP1O00291 1037 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 MTA2O94776 668 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 UPP2O95045 317 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC3A2P08195 630 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 IDEP14735 1019 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CABP4P57796 275 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 LRMPQ12912 555 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PRPF4BQ13523 1007 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SNW1Q13573 536 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 UBE4AQ14139 1066 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CEP135Q66GS9 1140 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NUGGCQ68CJ6 796 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ARHGEF18Q6ZSZ5 1173 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 BARGINQ6ZT62 677 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 BZW1Q7L1Q6 419 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 CNNM3Q8NE01 707 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SMARCC1Q92922 1105 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 BRF1Q92994 677 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 GJD4Q96KN9 370 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 ZSCAN31Q96LW9 406 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 NUP88Q99567 741 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 GORASP1Q9BQQ3 440 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SCAND2PQ9GZW5 306 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATS2LQ9NUQ6 558 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 PPP1R1BQ9UD71 204 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 AXIN2Q9Y2T1 843 aa4.11□□□□□ -1.75
PCDH11X-208ENST00000504220 TAF1LQ8IZX4 1826 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SPATA31A1Q5TZJ5 1347 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 KIF28PB7ZC32 967 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 KIF5CO60282 957 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PPP1R37O75864 691 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GLRX3O76003 335 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 OAS2P29728 719 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 HOXD12P35452 270 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 HALP42357 657 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GPC3P51654 580 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC8A3P57103 927 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 STIM1Q13586 685 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SIM2Q14190 667 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ANO6Q4KMQ2 910 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 TMC4Q7Z404 712 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ERC1Q8IUD2 1116 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GALNT15Q8N3T1 639 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 C1orf131Q8NDD1 294 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GIMAP7Q8NHV1 300 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PHACTR3Q96KR7 559 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 RPAP3Q9H6T3 665 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ZMAT5Q9UDW3 170 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SQORQ9Y6N5 450 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ITGB4P16144 1822 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 RANBP6O60518 1105 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 FSBPO95073 299 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 HOXC13P31276 330 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SLC39A6Q13433 755 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ERCC6LQ2NKX8 1250 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ANKRD13DQ6ZTN6 518 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PTF1AQ7RTS3 328 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ARHGAP22Q7Z5H3 698 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 LUZP1Q86V48 1076 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ZSCAN29Q8IWY8 852 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 AIDAQ96BJ3 306 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 MYD88Q99836 296 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 EPC1Q9H2F5 836 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 VAT1LQ9HCJ6 419 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PREBQ9HCU5 417 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 NOSIPQ9Y314 301 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 TNS2Q63HR2 1409 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 PI4KAP2A4QPH2 592 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 TBKBP1A7MCY6 615 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GOLGA8BA8MQT2 603 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 SART1O43290 800 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 STK10O94804 968 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 IFIT1P09914 478 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 GZMAP12544 262 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ALOX15P16050 662 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 ENDOUP21128 410 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 AFMP43652 599 aa4.1□□□□□ -1.75
PCDH11X-208ENST00000504220 STX17P56962 302 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms