RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 ZSCAN25Q6NSZ9 544 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 KIAA1683Q9H0B3 1180 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
SSBP2-202ENST00000504136 EVA1BQ9NVM1 165 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 RLFQ13129 1914 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 BRCA2P51587 3418 aa10.68□□□□□ -0.7
SSBP2-202ENST00000504136 F12P00748 615 aaPredicted RBP10.67□□□□□ -0.7
SSBP2-202ENST00000504136 GH2P01242 217 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 CERKLQ49MI3 558 aaPredicted RBP10.67□□□□□ -0.7
SSBP2-202ENST00000504136 GIMAP6Q6P9H5 292 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 LBX2Q6XYB7 198 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
SSBP2-202ENST00000504136 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 SMCR8Q8TEV9 937 aaPredicted RBP10.67□□□□□ -0.7
SSBP2-202ENST00000504136 GTF3C2Q8WUA4 911 aaPredicted RBP10.67□□□□□ -0.7
SSBP2-202ENST00000504136 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 PARP14Q460N5 1801 aa10.67□□□□□ -0.7
SSBP2-202ENST00000504136 ROBO3Q96MS0 1386 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 MYPNQ86TC9 1320 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 MBD4O95243 580 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 CHGBP05060 677 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 ZFYP08048 801 aaPredicted RBP10.66□□□□□ -0.7
SSBP2-202ENST00000504136 PRKCZQ05513 592 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 ABCB5Q2M3G0 1257 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 APPBP2Q92624 585 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
SSBP2-202ENST00000504136 ARMT1Q9H993 441 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 MCM9Q9NXL9 1143 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
SSBP2-202ENST00000504136 PRKAB2O43741 272 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 GLRX3O76003 335 aaKnown RBP10.65□□□□□ -0.7
SSBP2-202ENST00000504136 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.7
SSBP2-202ENST00000504136 CAPN2P17655 700 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 GRK4P32298 578 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 RFC5P40937 340 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 USP14P54578 494 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 HERVK_113P62684 666 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 TRIM32Q13049 653 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 LAPTM4AQ15012 233 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 SBK1Q52WX2 424 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 TICAM2Q86XR7 235 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 ANKRD13CQ8N6S4 541 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 GCC1Q96CN9 775 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 STRBPQ96SI9 672 aaKnown RBP10.65□□□□□ -0.7
SSBP2-202ENST00000504136 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 STAP2Q9UGK3 403 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
SSBP2-202ENST00000504136 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.71
SSBP2-202ENST00000504136 ERC2O15083 957 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 RNF113AO15541 343 aaKnown RBP10.64□□□□□ -0.71
SSBP2-202ENST00000504136 CYP2D6P10635 497 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 FLT3LGP49771 235 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 CTDSPL2Q05D32 466 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 ZNF697Q5TEC3 545 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 TMEM179Q6ZVK1 233 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 TSC1Q92574 1164 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 OSBP2Q969R2 916 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
SSBP2-202ENST00000504136 CABP5Q9NP86 173 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 RBPJLQ9UBG7 517 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 ARPP21Q9UBL0 812 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-202ENST00000504136 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
SSBP2-202ENST00000504136 MKI67P46013 3256 aaKnown RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 A0A1W2PRG0 241 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 USP17L21D6R901 530 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 LCE2BO14633 110 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 TNPO2O14787 897 aaKnown RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 ZBTB24O43167 697 aaPredicted RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 VCAM1P19320 739 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 MX1P20591 662 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 SEPT2Q15019 361 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 CATSPERGQ6ZRH7 1159 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 UBE2Q1Q7Z7E8 422 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 SIAH1Q8IUQ4 282 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 SMC5Q8IY18 1101 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 SLC44A5Q8NCS7 719 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 RAET1EQ8TD07 263 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 ACER1Q8TDN7 264 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
SSBP2-202ENST00000504136 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 TXNRD2Q9NNW7 524 aa10.63□□□□□ -0.71
SSBP2-202ENST00000504136 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms