RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC58-207ENST00000498466 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
CCDC58-207ENST00000498466 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
CCDC58-207ENST00000498466 GAS2L1Q99501 681 aaPredicted RBP16.78■□□□□ 0.28
CCDC58-207ENST00000498466 MROH7Q68CQ1 1323 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 USP17L21D6R901 530 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 COL9A1P20849 921 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC58-207ENST00000498466 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 VTI1AQ96AJ9 217 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 TBX21Q9UL17 535 aa16.77■□□□□ 0.28
CCDC58-207ENST00000498466 SYNGAP1Q96PV0 1343 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 SMCHD1A6NHR9 2005 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 SNAI1O95863 264 aaPredicted RBP16.76■□□□□ 0.27
CCDC58-207ENST00000498466 ADD2P35612 726 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 PBX2P40425 430 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 SNRNP48Q6IEG0 339 aaKnown RBP16.76■□□□□ 0.27
CCDC58-207ENST00000498466 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 TEX13BQ9BXU2 312 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 PBX4Q9BYU1 374 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
CCDC58-207ENST00000498466 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 PARP14Q460N5 1801 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 ELP1O95163 1332 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 C6orf222P0C671 652 aaPredicted RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 TMEM240Q5SV17 173 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 TMEM199Q8N511 208 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 PCSK9Q8NBP7 692 aaKnown RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC58-207ENST00000498466 PRDM12Q9H4Q4 367 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 SPC25Q9HBM1 224 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
CCDC58-207ENST00000498466 ASGR1P07306 291 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 ACRP10323 421 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 CSF2RAP15509 400 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 IRX5P78411 483 aaPredicted RBP16.74■□□□□ 0.27
CCDC58-207ENST00000498466 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 MAMDC4Q6UXC1 1216 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
CCDC58-207ENST00000498466 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 THEGQ9P2T0 379 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 CTDP1Q9Y5B0 961 aaPredicted RBP16.74■□□□□ 0.27
CCDC58-207ENST00000498466 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 MYH8P13535 1937 aa16.74■□□□□ 0.27
CCDC58-207ENST00000498466 PLXNA1Q9UIW2 1896 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 XIRP2A4UGR9 3374 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 DNAJC25-GNG10A0A024R161 153 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CST5P28325 142 aaPredicted RBP16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CDK7P50613 346 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 PSRC1Q6PGN9 363 aaPredicted RBP16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.73■□□□□ 0.27
CCDC58-207ENST00000498466 CHD9Q3L8U1 2897 aa16.73■□□□□ 0.27
CCDC58-207ENST00000498466 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 ARVCFO00192 962 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 TLR3O15455 904 aaKnown RBP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 CHGBP05060 677 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 IGFBP4P22692 258 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 CCDC144BQ3MJ40 725 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 RASIP1Q5U651 963 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 ZNF365Q70YC5 407 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 ASB2Q96Q27 587 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCDC58-207ENST00000498466 ABHD16BQ9H3Z7 469 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 MSRAQ9UJ68 235 aa16.72■□□□□ 0.27
CCDC58-207ENST00000498466 F5H6K3 240 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 ADCY6O43306 1168 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 ZBED4O75132 1171 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 GJA9P57773 515 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 KLRC3Q07444 240 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 RAB30Q15771 203 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 FAM126BQ8IXS8 530 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 ANKRD35Q8N283 1001 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 PANK1Q8TE04 598 aa16.71■□□□□ 0.27
CCDC58-207ENST00000498466 ARPP21Q9UBL0 812 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms