RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 LPXNO60711 386 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 PGK2P07205 417 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 DSG3P32926 999 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 KCTD2Q14681 263 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 PKN1Q16512 942 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 CERKLQ49MI3 558 aaPredicted RBP11.03□□□□□ -0.64
FAM3D-205ENST00000498347 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 ANKS1AQ92625 1134 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 TANGO6Q9C0B7 1094 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 LRP2BPQ9P2M1 347 aa11.03□□□□□ -0.64
FAM3D-205ENST00000498347 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
FAM3D-205ENST00000498347 MYADML2A6NDP7 307 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 PFKMP08237 780 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 MS4A1P11836 297 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 ACTN1P12814 892 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 IL9P15248 144 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 KCNA5P22460 613 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 GJA9P57773 515 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 TTLL4Q14679 1199 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 MVPQ14764 893 aaKnown RBP11.02□□□□□ -0.65
FAM3D-205ENST00000498347 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 PRSS33Q8NF86 280 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
FAM3D-205ENST00000498347 IRF2BPLQ9H1B7 796 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
FAM3D-205ENST00000498347 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
FAM3D-205ENST00000498347 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 CACNA1GO43497 2377 aa11.02□□□□□ -0.65
FAM3D-205ENST00000498347 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 CABYRO75952 493 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
FAM3D-205ENST00000498347 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
FAM3D-205ENST00000498347 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
FAM3D-205ENST00000498347 BMP8AQ7Z5Y6 402 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 VWCEQ96DN2 955 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
FAM3D-205ENST00000498347 SLC9A7Q96T83 725 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 UPF3AQ9H1J1 476 aaKnown RBP11.01□□□□□ -0.65
FAM3D-205ENST00000498347 PRKAG3Q9UGI9 489 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 FAM50BQ9Y247 325 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 AKAP2Q9Y2D5 859 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 ZNF536O15090 1300 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 FLT1P17948 1338 aa11.01□□□□□ -0.65
FAM3D-205ENST00000498347 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 ITGA7Q13683 1181 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 TMEM132BQ14DG7 1078 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 IER5LQ5T953 404 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
FAM3D-205ENST00000498347 MAMDC4Q6UXC1 1216 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 HERC6Q8IVU3 1022 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 SCLYQ96I15 445 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 AGBL1Q96MI9 1066 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 WNT8AQ9H1J5 351 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
FAM3D-205ENST00000498347 ZHX1Q9UKY1 873 aaPredicted RBP11□□□□□ -0.65
FAM3D-205ENST00000498347 RIF1Q5UIP0 2472 aaKnown RBP10.99□□□□□ -0.65
FAM3D-205ENST00000498347 WDFY4Q6ZS81 3184 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 FLOT1O75955 427 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 STAT3P40763 770 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 NKX3-2P78367 333 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 ACVR2BQ13705 512 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 GORABQ5T7V8 394 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 RIOX2Q8IUF8 465 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 ATG4CQ96DT6 458 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 NEUROD6Q96NK8 337 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 TRPV6Q9H1D0 765 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 CACNA1BQ00975 2339 aa10.99□□□□□ -0.65
FAM3D-205ENST00000498347 A0A1B0GUL7 405 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 A0A1W2PRG0 241 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 GUCY1A2P33402 732 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 COPB2P35606 906 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 TCF15Q12870 199 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 SEPT2Q15019 361 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 CCDC144BQ3MJ40 725 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 DEFB128Q7Z7B8 93 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 WDR63Q8IWG1 891 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 NEK9Q8TD19 979 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 DDX11Q96FC9 970 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 EHD4Q9H223 541 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 ABHD16BQ9H3Z7 469 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 ADAMTS5Q9UNA0 930 aa10.98□□□□□ -0.65
FAM3D-205ENST00000498347 CFAP54Q96N23 3096 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 CTAGE5O15320 804 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 SUPT20HL2P0C7V6 817 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 RFC2P35250 354 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 ZP2Q05996 745 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 HERC4Q5GLZ8 1057 aaPredicted RBP10.97□□□□□ -0.65
FAM3D-205ENST00000498347 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 PI16Q6UXB8 463 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 ADHFE1Q8IWW8 467 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 EDAQ92838 391 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 PBXIP1Q96AQ6 731 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 SUGCTQ9HAC7 445 aa10.97□□□□□ -0.65
FAM3D-205ENST00000498347 COPRSQ9NQ92 184 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms