RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 APBA2Q99767 749 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 PORCNQ9H237 461 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 INCENPQ9NQS7 918 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 SIPA1L1O43166 1804 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 B4DLN1 442 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 MSCO60682 206 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 CNMDO75829 334 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 REC8O95072 547 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 INHAP05111 366 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 CCL5P13501 91 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
PTPRN-218ENST00000497977 SOX10P56693 466 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 GRB14Q14449 540 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 KRT32Q14532 448 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 KIAA1755Q5JYT7 1200 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 MSL3Q8N5Y2 521 aaKnown RBP12.17□□□□□ -0.46
PTPRN-218ENST00000497977 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 MAF1Q9H063 256 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
PTPRN-218ENST00000497977 B4E1Z4 1266 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
PTPRN-218ENST00000497977 SGPL1O95470 568 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 HMGB1P09429 215 aaKnown RBP12.16□□□□□ -0.46
PTPRN-218ENST00000497977 ADORA2AP29274 412 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 GJA8P48165 433 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
PTPRN-218ENST00000497977 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 NUP88Q99567 741 aaPredicted RBP12.16□□□□□ -0.46
PTPRN-218ENST00000497977 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 NRBP1Q9UHY1 535 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 MTMR7Q9Y216 660 aa12.16□□□□□ -0.46
PTPRN-218ENST00000497977 E7EWF7 191 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 EPB41L2O43491 1005 aaKnown RBP12.15□□□□□ -0.46
PTPRN-218ENST00000497977 NMT2O60551 498 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 MYCP01106 439 aaPredicted RBP12.15□□□□□ -0.46
PTPRN-218ENST00000497977 CYP21A2P08686 494 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
PTPRN-218ENST00000497977 ELNP15502 786 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 MCM5P33992 734 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 WTAPQ15007 396 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 KCTD1Q719H9 257 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 USP6NLQ92738 828 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 IL25Q9H293 177 aa12.15□□□□□ -0.46
PTPRN-218ENST00000497977 ZNF214Q9UL59 606 aaPredicted RBP12.15□□□□□ -0.46
PTPRN-218ENST00000497977 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
PTPRN-218ENST00000497977 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
PTPRN-218ENST00000497977 CALM1P0DP23 149 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 CALM2P0DP24 149 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 CALM3P0DP25 149 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 KIF5BP33176 963 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 PTH1RQ03431 593 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 SYDE2Q5VT97 1194 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 TMEM87BQ96K49 555 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 HTATIP2Q9BUP3 242 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
PTPRN-218ENST00000497977 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
PTPRN-218ENST00000497977 TNKSO95271 1327 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 PDHBP11177 359 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
PTPRN-218ENST00000497977 CNGA1P29973 690 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 GNAQP50148 359 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 CAP1Q01518 475 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 NECTIN1Q15223 517 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
PTPRN-218ENST00000497977 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
PTPRN-218ENST00000497977 DEFB118Q96PH6 123 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTPRN-218ENST00000497977 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
PTPRN-218ENST00000497977 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
PTPRN-218ENST00000497977 PFASO15067 1338 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 ASB14A6NK59 587 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 ICAM1P05362 532 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 SNHG28P0DPA3 235 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 ALAS1P13196 640 aa12.12□□□□□ -0.47
PTPRN-218ENST00000497977 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms