RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 FAM153BP0C7A2 387 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 EPHB4P54760 987 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 FAM153CQ494X1 144 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 FAM153AQ9UHL3 310 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 TPX2Q9ULW0 747 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 REXO2Q9Y3B8 237 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 L3MBTL1Q9Y468 752 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PPP1R12AO14974 1030 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 HERVK_113P62684 666 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 CUL4BQ13620 913 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 SCARF1Q14162 830 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 MYCBPAPQ8TBZ2 947 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 STIM2Q9P246 746 aa11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-223ENST00000497597 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 TUBGCP6Q96RT7 1819 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 FTCDO95954 541 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 NHEJ1Q9H9Q4 299 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 NEURL4Q96JN8 1562 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 MAGEA1P43355 309 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 IFNAR2P48551 515 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 SPRED3Q2MJR0 410 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 ACCSLQ4AC99 568 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 EPN3Q9H201 632 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 NEXMIFQ5QGS0 1516 aa11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-223ENST00000497597 A0A087X0B3 334 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 XBP1P17861 261 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CCDC170Q8IYT3 715 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 WASF1Q92558 559 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 FAXDC2Q96IV6 333 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 METTL22Q9BUU2 404 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 SPATS2LQ9NUQ6 558 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 PLAAQ9Y263 795 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CAPN6Q9Y6Q1 641 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CDC42BPGQ6DT37 1551 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 TMCO5BA8MYB1 307 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 AP1G2O75843 785 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 STAT6P42226 847 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 RASSF7Q02833 373 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 SNX1Q13596 522 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 TRADDQ15628 312 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 PTGISQ16647 500 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 IFT20Q8IY31 132 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 TRIML1Q8N9V2 468 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CEP170BQ9Y4F5 1589 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 VIMP08670 466 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 WTAPQ15007 396 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 KRT71Q3SY84 523 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 METTL24Q5JXM2 366 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CSGALNACT2Q8N6G5 542 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 RPGRIP1Q96KN7 1286 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.527e-8■■□□□ 12.3
TRAPPC12-223ENST00000497597 IRAK4Q9NWZ3 460 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 MCM8Q9UJA3 840 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
TRAPPC12-223ENST00000497597 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 CTNNA1P35221 906 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 CYFIP2Q96F07 1278 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 PPLO60437 1756 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 LGR5O75473 907 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 PAK2Q13177 524 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 APPBP2Q92624 585 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 NOC4LQ9BVI4 516 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms