RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TANGO6Q9C0B7 1094 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 SLC45A1Q9Y2W3 748 aa23.39■■□□□ 1.33
CTSD-206ENST00000497544 PDHBP11177 359 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 IRX3P78415 501 aaPredicted RBP23.38■■□□□ 1.33
CTSD-206ENST00000497544 SP3Q02447 781 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 APOBRQ0VD83 1088 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 ANKRD1Q15327 319 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 CATSPERGQ6ZRH7 1159 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 NBPF11Q86T75 865 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 ALDH8A1Q9H2A2 487 aaPredicted RBP23.38■■□□□ 1.33
CTSD-206ENST00000497544 ZCCHC17Q9NP64 241 aaKnown RBP23.38■■□□□ 1.33
CTSD-206ENST00000497544 PNMA3Q9UL41 463 aa23.38■■□□□ 1.33
CTSD-206ENST00000497544 KLF18A0A0U1RQI7 1052 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 DDAH1O94760 285 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 CALM1P0DP23 149 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 CALM2P0DP24 149 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 CALM3P0DP25 149 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 TOB2Q14106 344 aaPredicted RBP23.37■■□□□ 1.33
CTSD-206ENST00000497544 KCTD1Q719H9 257 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 BRPF3Q9ULD4 1205 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 LOC285556D6RIA3 1793 aa23.37■■□□□ 1.33
CTSD-206ENST00000497544 TMEM232C9JQI7 657 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 PARP1P09874 1014 aaKnown RBP23.36■■□□□ 1.33
CTSD-206ENST00000497544 TROAPQ12815 778 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 IKQ13123 557 aaPredicted RBP23.36■■□□□ 1.33
CTSD-206ENST00000497544 GPATCH4Q5T3I0 446 aaKnown RBP23.36■■□□□ 1.33
CTSD-206ENST00000497544 SAMD1Q6SPF0 538 aaPredicted RBP23.36■■□□□ 1.33
CTSD-206ENST00000497544 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 CHURC1Q8WUH1 139 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 MYL10Q9BUA6 226 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 GPCPD1Q9NPB8 672 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 HOXC10Q9NYD6 342 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 FEM1BQ9UK73 627 aa23.36■■□□□ 1.33
CTSD-206ENST00000497544 FRMPD2Q68DX3 1309 aaPredicted RBP23.35■■□□□ 1.33
CTSD-206ENST00000497544 ZBTB43O43298 467 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 FLOT1O75955 427 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 SNHG28P0DPA3 235 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 AK2P54819 239 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 ZNF543Q08ER8 600 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 COG2Q14746 738 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 TAF1CQ15572 869 aaPredicted RBP23.35■■□□□ 1.33
CTSD-206ENST00000497544 ASPRV1Q53RT3 343 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 APOA5Q6Q788 366 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 CTCFLQ8NI51 663 aaPredicted RBP23.35■■□□□ 1.33
CTSD-206ENST00000497544 SHISA4Q96DD7 197 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 LARP6Q9BRS8 491 aaKnown RBP23.35■■□□□ 1.33
CTSD-206ENST00000497544 ASCC2Q9H1I8 757 aaPredicted RBP23.35■■□□□ 1.33
CTSD-206ENST00000497544 ZSWIM8A7E2V4 1837 aa23.35■■□□□ 1.33
CTSD-206ENST00000497544 KIF5BP33176 963 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 FAM160B2Q86V87 743 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 MICU3Q86XE3 530 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 MAP3K14Q99558 947 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 P2RX7Q99572 595 aaKnown RBP23.34■■□□□ 1.33
CTSD-206ENST00000497544 ZFYVE28Q9HCC9 887 aa23.34■■□□□ 1.33
CTSD-206ENST00000497544 ST18O60284 1047 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 GOLGA8HP0CJ92 632 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 RXRAP19793 462 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 STAT2P52630 851 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 GRM4Q14833 912 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 RAB11FIP4Q86YS3 637 aa23.33■■□□□ 1.33
CTSD-206ENST00000497544 PARK7Q99497 189 aaKnown RBP23.33■■□□□ 1.33
CTSD-206ENST00000497544 A0A1W2PPC1 479 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 PLA2G6O60733 806 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 CYP2C8P10632 490 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 DSG3P32926 999 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 EVCP57679 992 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 TTBK2Q6IQ55 1244 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
CTSD-206ENST00000497544 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 PRPF38AQ8NAV1 312 aaKnown RBP23.32■■□□□ 1.32
CTSD-206ENST00000497544 FANCBQ8NB91 859 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 SMCR8Q8TEV9 937 aaPredicted RBP23.32■■□□□ 1.32
CTSD-206ENST00000497544 KIFC2Q96AC6 838 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 ZNF274Q96GC6 653 aaPredicted RBP23.32■■□□□ 1.32
CTSD-206ENST00000497544 SLF1Q9BQI6 1058 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 FBXO28Q9NVF7 368 aa23.32■■□□□ 1.32
CTSD-206ENST00000497544 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
CTSD-206ENST00000497544 GOLGA8AA7E2F4 631 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 GOLGA8BA8MQT2 603 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 KLRF2D3W0D1 207 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 GNAQP50148 359 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 RCAN1P53805 252 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 STAG2Q8N3U4 1231 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 SH3TC2Q8TF17 1288 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 MAD2L2Q9UI95 211 aa23.31■■□□□ 1.32
CTSD-206ENST00000497544 CTDP1Q9Y5B0 961 aaPredicted RBP23.31■■□□□ 1.32
CTSD-206ENST00000497544 PDIA3P30101 505 aaKnown RBP23.3■■□□□ 1.32
CTSD-206ENST00000497544 SLC16A2P36021 539 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 METAP2P50579 478 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTSD-206ENST00000497544 HERVK_113P62684 666 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 RTN1Q16799 776 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 BTNL9Q6UXG8 535 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 UBA5Q9GZZ9 404 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 MYPNQ86TC9 1320 aa23.3■■□□□ 1.32
CTSD-206ENST00000497544 CCDC196A0A1B0GTZ2 297 aa23.29■■□□□ 1.32
CTSD-206ENST00000497544 DHX16O60231 1041 aaKnown RBP23.29■■□□□ 1.32
CTSD-206ENST00000497544 PPP2R5BQ15173 497 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms