RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 PUS7LQ9H0K6 701 aaKnown RBP11.68□□□□□ -0.54
SCNM1-206ENST00000497147 C11orf16Q9NQ32 467 aa11.68□□□□□ -0.54
SCNM1-206ENST00000497147 XPNPEP3Q9NQH7 507 aa11.68□□□□□ -0.54
SCNM1-206ENST00000497147 HELLSQ9NRZ9 838 aa11.68□□□□□ -0.54
SCNM1-206ENST00000497147 FLT1P17948 1338 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 TCF20Q9UGU0 1960 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 M0R2C6 588 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 GPAA1O43292 621 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 TIMP1P01033 207 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 ALYREFQ86V81 257 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 CRACR2BQ8N4Y2 399 aaPredicted RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 SLC44A5Q8NCS7 719 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 TOX2Q96NM4 488 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 SEC62Q99442 399 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 SAP30BPQ9UHR5 308 aaKnown RBP11.67□□□□□ -0.54
SCNM1-206ENST00000497147 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 CDK5RAP2Q96SN8 1893 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
SCNM1-206ENST00000497147 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 PLXNA1Q9UIW2 1896 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 ZNF236Q9UL36 1845 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 A0A0D9SFI3 127 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 STRNO43815 780 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 APPP05067 770 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 GNAT2P19087 354 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 ERCC3P19447 782 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 TMEM31Q5JXX7 168 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 MFSD5Q6N075 450 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 MAML3Q96JK9 1138 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 FEZ1Q99689 392 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 KIAA1683Q9H0B3 1180 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
SCNM1-206ENST00000497147 YBX2Q9Y2T7 364 aaKnown RBP11.66□□□□□ -0.54
SCNM1-206ENST00000497147 WDFY4Q6ZS81 3184 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 MUC6Q6W4X9 2439 aa11.66□□□□□ -0.54
SCNM1-206ENST00000497147 DCDC2CA8MYV0 355 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 CDC45O75419 566 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 ACRP10323 421 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 RARBP10826 455 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 CSF2RAP15509 400 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 TAL1P17542 331 aaPredicted RBP11.65□□□□□ -0.54
SCNM1-206ENST00000497147 CHMLP26374 656 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 RNF180Q86T96 592 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
SCNM1-206ENST00000497147 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.54
SCNM1-206ENST00000497147 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 SPATC1LQ9H0A9 340 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 ATP8A2Q9NTI2 1148 aa11.65□□□□□ -0.54
SCNM1-206ENST00000497147 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 RAD50Q92878 1312 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 FAM86C2PA6NEL3 165 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 PRKAB2O43741 272 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 ADAMTS4O75173 837 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 ACLYP53396 1101 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 USP14P54578 494 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 PPIGQ13427 754 aaKnown RBP eCLIP11.64□□□□□ -0.554e-6■■□□□ 13.5
SCNM1-206ENST00000497147 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 MICALL1Q8N3F8 863 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 SHCBP1Q8NEM2 672 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
SCNM1-206ENST00000497147 MSRAQ9UJ68 235 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 MYH1P12882 1939 aa11.64□□□□□ -0.55
SCNM1-206ENST00000497147 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
SCNM1-206ENST00000497147 GPR37L1O60883 481 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
SCNM1-206ENST00000497147 TDO2P48775 406 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
SCNM1-206ENST00000497147 ABRAQ8N0Z2 381 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 SNX27Q96L92 541 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
SCNM1-206ENST00000497147 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 MCM9Q9NXL9 1143 aa11.63□□□□□ -0.55
SCNM1-206ENST00000497147 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 TLL1O43897 1013 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 ZNF865P0CJ78 1059 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-206ENST00000497147 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 CDK7P50613 346 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
SCNM1-206ENST00000497147 COG2Q14746 738 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 RAB30Q15771 203 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 KIAA1755Q5JYT7 1200 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 GIMAP6Q6P9H5 292 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
SCNM1-206ENST00000497147 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms