RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PLA2G5P39877 138 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 YARSP54577 528 aaKnown RBP5□□□□□ -1.61
EXOSC3-208ENST00000496910 EIF6P56537 245 aaKnown RBP5□□□□□ -1.61
EXOSC3-208ENST00000496910 PRSS36Q5K4E3 855 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 CCDC181Q5TID7 509 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 LETMD1Q6P1Q0 360 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 TMEM192Q8IY95 271 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 OR6P1Q8NGX9 317 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 XAGE3Q8WTP9 111 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 TBC1D32Q96NH3 1257 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 KIF2CQ99661 725 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 MIPEPQ99797 713 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 TM9SF2Q99805 663 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 TNKS2Q9H2K2 1166 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 SSU72Q9NP77 194 aaKnown RBP5□□□□□ -1.61
EXOSC3-208ENST00000496910 MRVI1Q9Y6F6 885 aa5□□□□□ -1.61
EXOSC3-208ENST00000496910 LTBP3Q9NS15 1303 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 A0A1W2PQH9 124 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 KLF4O43474 513 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 KCNQ2O43526 872 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 GUCY2CP25092 1073 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 HABP4Q5JVS0 413 aaKnown RBP4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 GORABQ5T7V8 394 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 C22orf34Q6ZV56 151 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 SLC51AQ86UW1 340 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 PPFIBP1Q86W92 1011 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 VPS37DQ86XT2 251 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 OSBPL2Q9H1P3 480 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 PRKAG3Q9UGI9 489 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 CEP131Q9UPN4 1083 aa4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 NOP58Q9Y2X3 529 aaKnown RBP4.99□□□□□ -1.61
EXOSC3-208ENST00000496910 AKNAQ7Z591 1439 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 ATP10DQ9P241 1426 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 GOLGB1Q14789 3259 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 PRR33A8MZF0 331 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 SMAD7O15105 426 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 GSC2O15499 205 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 PEX14O75381 377 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 ZNF865P0CJ78 1059 aaPredicted RBP4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 CCNFP41002 786 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 BMS1Q14692 1282 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 UNC5AQ6ZN44 842 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 TTC6Q86TZ1 520 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 CDH24Q86UP0 819 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 FBXL6Q8N531 539 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 GCC1Q96CN9 775 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 ANAPC16Q96DE5 110 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 CCDC74BQ96LY2 380 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 Q96M66 194 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 SEMA6BQ9H3T3 888 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 CHPF2Q9P2E5 772 aa4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 MRPL42Q9Y6G3 142 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-208ENST00000496910 COL16A1Q07092 1604 aaPredicted RBP4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 SHPRHQ149N8 1683 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 SYNMO15061 1565 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 RALGAPBQ86X10 1494 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 WDR64B1ANS9 1081 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 IGF2BP3O00425 579 aaKnown RBP eCLIP4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 SHOXO15266 292 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 ADAM23O75077 832 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 RAG1P15918 1043 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 OXCT1P55809 520 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 ANAPC15P60006 121 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 SERINC3Q13530 473 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 CPSF6Q16630 551 aaKnown RBP eCLIP4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 FBXW10Q5XX13 1052 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 KLHL6Q8WZ60 621 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 KREMEN1Q96MU8 473 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 PLAGL2Q9UPG8 496 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 MAPK8IP1Q9UQF2 711 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 FAN1Q9Y2M0 1017 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 COL4A3BPQ9Y5P4 624 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 FGD6Q6ZV73 1430 aa4.97□□□□□ -1.61
EXOSC3-208ENST00000496910 PHLDB1Q86UU1 1377 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 CCDC194A0A1B0GVG4 234 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 C9IYK1 514 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 TGFB1P01137 390 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 SSBP05455 408 aaKnown RBP eCLIP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 IBSPP21815 317 aaPredicted RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 HSD3B2P26439 372 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 HOXA10P31260 410 aaPredicted RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 NKPD1Q17RQ9 610 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 MSMPQ1L6U9 139 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 PLEKHG6Q3KR16 790 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 NBPF12Q5TAG4 269 aaPredicted RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 PHACTR4Q8IZ21 702 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 RPUSD2Q8IZ73 545 aaKnown RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 CELF2-AS1Q8N7Q2 184 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 RNF141Q8WVD5 230 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 HNRNPLLQ8WVV9 542 aaKnown RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 FAM122AQ96E09 287 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 FBXL18Q96ME1 805 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 SLC6A18Q96N87 628 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 SUCOQ9UBS9 1254 aaKnown RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 ZNF214Q9UL59 606 aaPredicted RBP4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 CAPN6Q9Y6Q1 641 aa4.96□□□□□ -1.62
EXOSC3-208ENST00000496910 POLR1AO95602 1720 aaPredicted RBP4.95□□□□□ -1.62
EXOSC3-208ENST00000496910 COL6A3P12111 3177 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms