RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 UPF3BQ9BZI7 483 aaKnown RBP14.3□□□□□ -0.12
ATG3-209ENST00000496423 EHD4Q9H223 541 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
ATG3-209ENST00000496423 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 ZNF536O15090 1300 aa14.3□□□□□ -0.12
ATG3-209ENST00000496423 A0A0G2JMZ2 1700 aa14.29□□□□□ -0.12
ATG3-209ENST00000496423 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
ATG3-209ENST00000496423 USP5P45974 858 aa14.29□□□□□ -0.12
ATG3-209ENST00000496423 PTPN5P54829 565 aa14.29□□□□□ -0.12
ATG3-209ENST00000496423 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
ATG3-209ENST00000496423 LEXMQ3ZCV2 418 aa14.29□□□□□ -0.12
ATG3-209ENST00000496423 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
ATG3-209ENST00000496423 UBE2ZQ9H832 354 aaPredicted RBP14.29□□□□□ -0.12
ATG3-209ENST00000496423 MYH1P12882 1939 aa14.29□□□□□ -0.12
ATG3-209ENST00000496423 GJA9P57773 515 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 GRB10Q13322 594 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 KRT40Q6A162 431 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 RIOX2Q8IUF8 465 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 DDX11Q96FC9 970 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 COPRSQ9NQ92 184 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 TRANK1O15050 2925 aa14.28□□□□□ -0.12
ATG3-209ENST00000496423 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.12
ATG3-209ENST00000496423 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
ATG3-209ENST00000496423 ZEB2O60315 1214 aa14.27□□□□□ -0.13
ATG3-209ENST00000496423 PKN1Q16512 942 aa14.27□□□□□ -0.13
ATG3-209ENST00000496423 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.13
ATG3-209ENST00000496423 ABHD16BQ9H3Z7 469 aa14.27□□□□□ -0.13
ATG3-209ENST00000496423 PRKRIP1Q9H875 184 aaPredicted RBP14.27□□□□□ -0.13
ATG3-209ENST00000496423 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
ATG3-209ENST00000496423 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 ARID4AP29374 1257 aaPredicted RBP14.26□□□□□ -0.13
ATG3-209ENST00000496423 STAT3P40763 770 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 TAP1Q03518 808 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 ACVR2BQ13705 512 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
ATG3-209ENST00000496423 IRF2BPLQ9H1B7 796 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 UPF3AQ9H1J1 476 aaKnown RBP14.26□□□□□ -0.13
ATG3-209ENST00000496423 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
ATG3-209ENST00000496423 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
ATG3-209ENST00000496423 MYADML2A6NDP7 307 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 KCNA5P22460 613 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 TFCP2Q12800 502 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 SEPT2Q15019 361 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 MAMDC4Q6UXC1 1216 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
ATG3-209ENST00000496423 UMODL1Q5DID0 1318 aa14.24□□□□□ -0.13
ATG3-209ENST00000496423 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
ATG3-209ENST00000496423 SNAI1O95863 264 aaPredicted RBP14.24□□□□□ -0.13
ATG3-209ENST00000496423 RFC2P35250 354 aa14.24□□□□□ -0.13
ATG3-209ENST00000496423 NOL8Q76FK4 1167 aaKnown RBP14.24□□□□□ -0.13
ATG3-209ENST00000496423 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
ATG3-209ENST00000496423 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
ATG3-209ENST00000496423 PRKAG3Q9UGI9 489 aa14.24□□□□□ -0.13
ATG3-209ENST00000496423 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
ATG3-209ENST00000496423 CACNA1AO00555 2505 aa14.24□□□□□ -0.13
ATG3-209ENST00000496423 GRXCR2A6NFK2 248 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
ATG3-209ENST00000496423 GFRA3O60609 400 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 POLR3DP05423 398 aaPredicted RBP14.23□□□□□ -0.13
ATG3-209ENST00000496423 IL9P15248 144 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 MCAMP43121 646 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 TTLL4Q14679 1199 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 HFE2Q6ZVN8 426 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 SCLYQ96I15 445 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 WNT8AQ9H1J5 351 aa14.23□□□□□ -0.13
ATG3-209ENST00000496423 KCNJ6P48051 423 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 CCDC158Q5M9N0 1113 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 TMEM179Q6ZVK1 233 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 ERMP1Q7Z2K6 904 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
ATG3-209ENST00000496423 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
ATG3-209ENST00000496423 AP5M1Q9H0R1 490 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 CTNNA3Q9UI47 895 aa14.22□□□□□ -0.13
ATG3-209ENST00000496423 COL11A1P12107 1806 aaPredicted RBP14.21□□□□□ -0.13
ATG3-209ENST00000496423 A0A1W2PRG0 241 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 B4GALT4O60513 344 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 CYP7A1P22680 504 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 GUCY1A2P33402 732 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 SHMT1P34896 483 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 NKX3-2P78367 333 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 CXCL17Q6UXB2 119 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 MAGEB6Q8N7X4 407 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 RETREG2Q8NC44 543 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 PHOX2BQ99453 314 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
ATG3-209ENST00000496423 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms