RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 TEX13BQ9BXU2 312 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 SMCHD1A6NHR9 2005 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
CXCL12-208ENST00000496375 LRRC41Q15345 812 aa17.11■□□□□ 0.33
CXCL12-208ENST00000496375 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
CXCL12-208ENST00000496375 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
CXCL12-208ENST00000496375 SLC39A5Q6ZMH5 540 aa17.11■□□□□ 0.33
CXCL12-208ENST00000496375 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-208ENST00000496375 PRPF38AQ8NAV1 312 aaKnown RBP17.11■□□□□ 0.33
CXCL12-208ENST00000496375 MKL1Q969V6 931 aa17.11■□□□□ 0.33
CXCL12-208ENST00000496375 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-208ENST00000496375 TINF2Q9BSI4 451 aa17.11■□□□□ 0.33
CXCL12-208ENST00000496375 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
CXCL12-208ENST00000496375 RARBP10826 455 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 ADCYAP1R1P41586 468 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 LRRC47Q8N1G4 583 aaKnown RBP17.1■□□□□ 0.33
CXCL12-208ENST00000496375 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 NAPBQ9H115 298 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 XPNPEP3Q9NQH7 507 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
CXCL12-208ENST00000496375 ZBED4O75132 1171 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 TTLL1O95922 423 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 TAL1P17542 331 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-208ENST00000496375 PDE4AP27815 886 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 SLC4A3P48751 1232 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 PDE4BQ07343 736 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 CPXCR1Q8N123 301 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 NEDD1Q8NHV4 660 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-208ENST00000496375 PLIN4Q96Q06 1357 aa17.09■□□□□ 0.33
CXCL12-208ENST00000496375 LTBP2Q14767 1821 aa17.08■□□□□ 0.33
CXCL12-208ENST00000496375 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
CXCL12-208ENST00000496375 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-208ENST00000496375 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 PPARAQ07869 468 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 SNX17Q15036 470 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 TRIM60Q495X7 471 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 Q7L0L9 218 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 DEFB123Q8N688 67 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 GMCL1P1Q8NEA9 526 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 PRDM5Q9NQX1 630 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-208ENST00000496375 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 CNPY2Q9Y2B0 182 aa17.08■□□□□ 0.32
CXCL12-208ENST00000496375 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 PGK1P00558 417 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 AKR1A1P14550 325 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 TFAP4Q01664 338 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 SLFN13Q68D06 897 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 RNF180Q86T96 592 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 EVI5LQ96CN4 794 aa17.07■□□□□ 0.32
CXCL12-208ENST00000496375 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
CXCL12-208ENST00000496375 DNAJC25-GNG10A0A024R161 153 aa17.06■□□□□ 0.32
CXCL12-208ENST00000496375 BMP3P12645 472 aa17.06■□□□□ 0.32
CXCL12-208ENST00000496375 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
CXCL12-208ENST00000496375 LENG1Q96BZ8 264 aaPredicted RBP17.06■□□□□ 0.32
CXCL12-208ENST00000496375 ISY1Q9ULR0 285 aaKnown RBP17.06■□□□□ 0.32
CXCL12-208ENST00000496375 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
CXCL12-208ENST00000496375 SYNGAP1Q96PV0 1343 aa17.05■□□□□ 0.32
CXCL12-208ENST00000496375 FOXP2O15409 715 aa17.05■□□□□ 0.32
CXCL12-208ENST00000496375 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
CXCL12-208ENST00000496375 PDLIM7Q9NR12 457 aa17.05■□□□□ 0.32
CXCL12-208ENST00000496375 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
CXCL12-208ENST00000496375 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
CXCL12-208ENST00000496375 OAZ1P54368 228 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 CTDSPL2Q05D32 466 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.04■□□□□ 0.32
CXCL12-208ENST00000496375 ANKRD35Q8N283 1001 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 CHST13Q8NET6 341 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 FBXO40Q9UH90 709 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
CXCL12-208ENST00000496375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
CXCL12-208ENST00000496375 MCM3APO60318 1980 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-208ENST00000496375 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 TRIM43BA6NCK2 446 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 ADAMTS4O75173 837 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 SLC1A4P43007 532 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 STAT2P52630 851 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 TLE2Q04725 743 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 IKQ13123 557 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-208ENST00000496375 SH3RF1Q7Z6J0 888 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 ZNF467Q7Z7K2 595 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-208ENST00000496375 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms