RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 SLC1A4P43007 532 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 CACNB2Q08289 660 aaPredicted RBP20.13■□□□□ 0.81
COMMD3-214ENST00000496071 CHURC1Q8WUH1 139 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 TTC14Q96N46 770 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 CRISPLD2Q9H0B8 497 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 ZNFX1Q9P2E3 1918 aaKnown RBP20.13■□□□□ 0.81
COMMD3-214ENST00000496071 LAMA4Q16363 1823 aa20.13■□□□□ 0.81
COMMD3-214ENST00000496071 ATP2A1O14983 1001 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 PLA2G6O60733 806 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
COMMD3-214ENST00000496071 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 CENPQQ7L2Z9 268 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-214ENST00000496071 FAM160B2Q86V87 743 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 ESR2Q92731 530 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 KIFC2Q96AC6 838 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 TEX13BQ9BXU2 312 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 NBPF3Q9H094 633 aa20.12■□□□□ 0.81
COMMD3-214ENST00000496071 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 TOP1P11387 765 aaKnown RBP20.11■□□□□ 0.81
COMMD3-214ENST00000496071 MCCP23508 829 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 CHMLP26374 656 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 STAT2P52630 851 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 OLFML2BQ68BL8 750 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 TBC1D10CQ8IV04 446 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 ANKLE1Q8NAG6 615 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 SLC38A10Q9HBR0 1119 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
COMMD3-214ENST00000496071 PDE4DIPQ5VU43 2346 aa20.11■□□□□ 0.81
COMMD3-214ENST00000496071 OAZ1P54368 228 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 KCTD2Q14681 263 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 CCDC178Q5BJE1 867 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 PRPF38BQ5VTL8 546 aaKnown RBP20.1■□□□□ 0.81
COMMD3-214ENST00000496071 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
COMMD3-214ENST00000496071 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 MMP19Q99542 508 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 FLRT1Q9NZU1 646 aa20.1■□□□□ 0.81
COMMD3-214ENST00000496071 COBLO75128 1261 aa20.09■□□□□ 0.81
COMMD3-214ENST00000496071 FARP2O94887 1054 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-214ENST00000496071 IKQ13123 557 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-214ENST00000496071 CPXCR1Q8N123 301 aa20.09■□□□□ 0.81
COMMD3-214ENST00000496071 DCAF4Q8WV16 495 aa20.09■□□□□ 0.81
COMMD3-214ENST00000496071 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
COMMD3-214ENST00000496071 IQCA1Q86XH1 822 aa20.08■□□□□ 0.81
COMMD3-214ENST00000496071 TMEM47Q9BQJ4 181 aa20.08■□□□□ 0.81
COMMD3-214ENST00000496071 KRT23Q9C075 422 aa20.08■□□□□ 0.81
COMMD3-214ENST00000496071 CNNM2Q9H8M5 875 aa20.08■□□□□ 0.81
COMMD3-214ENST00000496071 DIS3Q9Y2L1 958 aaKnown RBP20.08■□□□□ 0.81
COMMD3-214ENST00000496071 NEDD4P46934 1319 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 IGHA2P01877 340 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
COMMD3-214ENST00000496071 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 DGKHQ86XP1 1220 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 IL25Q9H293 177 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 RAVER2Q9HCJ3 691 aaKnown RBP20.07■□□□□ 0.8
COMMD3-214ENST00000496071 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 OGDHLQ9ULD0 1010 aa20.07■□□□□ 0.8
COMMD3-214ENST00000496071 MSCO60682 206 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 CYP2C19P33261 490 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 CHST13Q8NET6 341 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 MTMR7Q9Y216 660 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 RIPK3Q9Y572 518 aa20.06■□□□□ 0.8
COMMD3-214ENST00000496071 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 BRCA2P51587 3418 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 SGSM2O43147 1006 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 KDM4AO75164 1064 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 CNGA1P29973 690 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.05■□□□□ 0.8
COMMD3-214ENST00000496071 NECAB2Q7Z6G3 386 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 CHMP4CQ96CF2 233 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
COMMD3-214ENST00000496071 B4E1Z4 1266 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 TKFCQ3LXA3 575 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 LHX8Q68G74 356 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 DPF3Q92784 378 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 ZSWIM5Q9P217 1185 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
COMMD3-214ENST00000496071 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
COMMD3-214ENST00000496071 PGK2P07205 417 aa20.03■□□□□ 0.8
COMMD3-214ENST00000496071 CYBAP13498 195 aa20.03■□□□□ 0.8
COMMD3-214ENST00000496071 ANKS1AQ92625 1134 aa20.03■□□□□ 0.8
COMMD3-214ENST00000496071 PAWRQ96IZ0 340 aaKnown RBP20.03■□□□□ 0.8
COMMD3-214ENST00000496071 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
COMMD3-214ENST00000496071 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
COMMD3-214ENST00000496071 DDX20Q9UHI6 824 aaKnown RBP20.03■□□□□ 0.8
COMMD3-214ENST00000496071 NRBP1Q9UHY1 535 aa20.03■□□□□ 0.8
COMMD3-214ENST00000496071 PDHBP11177 359 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 KCNA4P22459 653 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 PTH1RQ03431 593 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 TRDNQ13061 729 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 MSL3Q8N5Y2 521 aaKnown RBP20.02■□□□□ 0.8
COMMD3-214ENST00000496071 TINF2Q9BSI4 451 aa20.02■□□□□ 0.8
COMMD3-214ENST00000496071 ZNF536O15090 1300 aa20.02■□□□□ 0.79
COMMD3-214ENST00000496071 DNAJC25-GNG10A0A024R161 153 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms