RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
MRPL55-232ENST00000495434 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
MRPL55-232ENST00000495434 RAD50Q92878 1312 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 NMT2O60551 498 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 COBLO75128 1261 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 ZBED4O75132 1171 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 SLC1A4P43007 532 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 OAZ1P54368 228 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.57■□□□□ 0.24
MRPL55-232ENST00000495434 FAM160B2Q86V87 743 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 TTC14Q96N46 770 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 SLC38A10Q9HBR0 1119 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
MRPL55-232ENST00000495434 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
MRPL55-232ENST00000495434 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 STAT2P52630 851 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 HAND2P61296 217 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 MMP19Q99542 508 aa16.56■□□□□ 0.24
MRPL55-232ENST00000495434 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-232ENST00000495434 TMEM232C9JQI7 657 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 MSCO60682 206 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 MCCP23508 829 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 KCTD2Q14681 263 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
MRPL55-232ENST00000495434 SNRNP48Q6IEG0 339 aaKnown RBP16.55■□□□□ 0.24
MRPL55-232ENST00000495434 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 ESR2Q92731 530 aa16.55■□□□□ 0.24
MRPL55-232ENST00000495434 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
MRPL55-232ENST00000495434 CCND3P30281 292 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-232ENST00000495434 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
MRPL55-232ENST00000495434 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 LHX8Q68G74 356 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 NECAB2Q7Z6G3 386 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 MAML3Q96JK9 1138 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 FBXO40Q9UH90 709 aa16.54■□□□□ 0.24
MRPL55-232ENST00000495434 PLXNA1Q9UIW2 1896 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 CYBAP13498 195 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 CHMLP26374 656 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 CYP2C19P33261 490 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 ZNF792Q3KQV3 632 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
MRPL55-232ENST00000495434 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 NRBP1Q9UHY1 535 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
MRPL55-232ENST00000495434 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-232ENST00000495434 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
MRPL55-232ENST00000495434 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
MRPL55-232ENST00000495434 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
MRPL55-232ENST00000495434 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
MRPL55-232ENST00000495434 DPF3Q92784 378 aa16.52■□□□□ 0.24
MRPL55-232ENST00000495434 IL25Q9H293 177 aa16.52■□□□□ 0.24
MRPL55-232ENST00000495434 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
MRPL55-232ENST00000495434 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.24
MRPL55-232ENST00000495434 NEDD4P46934 1319 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 DNAJC25-GNG10A0A024R161 153 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-232ENST00000495434 TKFCQ3LXA3 575 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 KCTD1Q719H9 257 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-232ENST00000495434 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 TRPV1Q8NER1 839 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 KRT23Q9C075 422 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
MRPL55-232ENST00000495434 FRMPD3Q5JV73 1810 aa16.51■□□□□ 0.23
MRPL55-232ENST00000495434 SEPT4O43236 478 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 PGK2P07205 417 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 CNGA1P29973 690 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-232ENST00000495434 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
MRPL55-232ENST00000495434 ANKS1AQ92625 1134 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 TINF2Q9BSI4 451 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
MRPL55-232ENST00000495434 ZNF536O15090 1300 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 SGSM2O43147 1006 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 KDM4AO75164 1064 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 SNHG28P0DPA3 235 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 PDHBP11177 359 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 ZSWIM5Q9P217 1185 aa16.49■□□□□ 0.23
MRPL55-232ENST00000495434 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
MRPL55-232ENST00000495434 B4E1Z4 1266 aa16.48■□□□□ 0.23
MRPL55-232ENST00000495434 COL6A1P12109 1028 aa16.48■□□□□ 0.23
MRPL55-232ENST00000495434 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
MRPL55-232ENST00000495434 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
MRPL55-232ENST00000495434 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
MRPL55-232ENST00000495434 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms