RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PRDM10Q9NQV6 1147 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 ZNF70Q9UC06 446 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 PFKFB1P16118 471 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 PTPREP23469 700 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 EARS2Q5JPH6 523 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 RESP18Q5W5W9 173 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 TMEM179Q6ZVK1 233 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 HEATR3Q7Z4Q2 680 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 BLIDQ8IZY5 108 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 SPC24Q8NBT2 197 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 CSRNP1Q96S65 589 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 NYAP2Q9P242 653 aa21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 SEC63Q9UGP8 760 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 HERC5Q9UII4 1024 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-212ENST00000494815 STXBP3O00186 592 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 PTGER2P43116 358 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 SHC4Q6S5L8 630 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 FAM151AQ8WW52 585 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 MKL1Q969V6 931 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 HPSEQ9Y251 543 aa21.15■□□□□ 0.98
TSPAN4-212ENST00000494815 FAM205CA6NFA0 338 aa21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 FAM196BA6NMK8 535 aa21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 hCG_1984214I3L0E3 225 aa21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 ZNF543Q08ER8 600 aa21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 TNIP1Q15025 636 aa21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 GPATCH4Q5T3I0 446 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 ZNF713Q8N859 430 aaPredicted RBP21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 FBXO2Q9UK22 296 aaPredicted RBP21.14■□□□□ 0.98
TSPAN4-212ENST00000494815 RIOK3O14730 519 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 SLURP2P0DP57 97 aa21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 TIGD1Q96MW7 591 aa21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 SRPRBQ9Y5M8 271 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-212ENST00000494815 ZNF202O95125 648 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 ZSCAN20P17040 1043 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 ZBED3Q96IU2 234 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 CLRN2A0PK11 232 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 TCP10L2B9ZVM9 353 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 CAVIN2O95810 425 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 TTC38Q5R3I4 469 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 CLIC6Q96NY7 704 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 ZMYND12Q9H0C1 365 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
TSPAN4-212ENST00000494815 M0R2N6 131 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 CTIFO43310 598 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 MYO1BO43795 1136 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 SYKP43405 635 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 ABCB5Q2M3G0 1257 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 PIK3AP1Q6ZUJ8 805 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 ANKRD7Q92527 254 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 FRMPD2Q68DX3 1309 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 SOCS7O14512 581 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 RPS12P25398 132 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 ATP2B2Q01814 1243 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 FAM83AQ86UY5 434 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 HOMER1Q86YM7 354 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 PDCL2Q8N4E4 241 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 PIGSQ96S52 555 aa21.12■□□□□ 0.97
TSPAN4-212ENST00000494815 MYH4Q9Y623 1939 aa21.11■□□□□ 0.97
TSPAN4-212ENST00000494815 CNTNAP1P78357 1384 aa21.11■□□□□ 0.97
TSPAN4-212ENST00000494815 EEF2P13639 858 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-212ENST00000494815 NAPAP54920 295 aa21.11■□□□□ 0.97
TSPAN4-212ENST00000494815 UBA5Q9GZZ9 404 aa21.11■□□□□ 0.97
TSPAN4-212ENST00000494815 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 PTGS1P23219 599 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 GNA11P29992 359 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 ICA1Q05084 483 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 NOM1Q5C9Z4 860 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 FERMT2Q96AC1 680 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 PSDA5PKW4 1024 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 CBX1P83916 185 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 SEPT2Q15019 361 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 RBM26Q5T8P6 1007 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 DCAF4Q8WV16 495 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 VAT1LQ9HCJ6 419 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 C6orf50Q9HD87 102 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 SYNPO2Q9UMS6 1093 aa21.1■□□□□ 0.97
TSPAN4-212ENST00000494815 CCDC194A0A1B0GVG4 234 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 GPCPD1Q9NPB8 672 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 MYOZ2Q9NPC6 264 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 KCNH3Q9ULD8 1083 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 PCDHA6Q9UN73 950 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 PCDHA8Q9Y5H6 950 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 ADAMTS3O15072 1205 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 ZNF280AP59817 542 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 ATP2C1P98194 919 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 STX1AQ16623 288 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 CCDC96Q2M329 555 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 ANO6Q4KMQ2 910 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 BBXQ8WY36 941 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 VEZTQ9HBM0 779 aa21.09■□□□□ 0.97
TSPAN4-212ENST00000494815 WNT10BO00744 389 aa21.08■□□□□ 0.97
TSPAN4-212ENST00000494815 GDF11O95390 407 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms