RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 SLC6A18Q96N87 628 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 ZSWIM4Q9H7M6 989 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
LRIF1-203ENST00000494675 CCDC85CA6NKD9 419 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 H3BS24 57 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 TMEM253P0C7T8 217 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 CCDC144BQ3MJ40 725 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 BBS9Q3SYG4 887 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 GNPTABQ3T906 1256 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 VHLLQ6RSH7 139 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 THAP5Q7Z6K1 395 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 CELF2-AS1Q8N7Q2 184 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 FBXO15Q8NCQ5 510 aaPredicted RBP4.19□□□□□ -1.74
LRIF1-203ENST00000494675 OSBPL2Q9H1P3 480 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 SEMA3GQ9NS98 782 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 SIRPGQ9P1W8 387 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 PCDHB10Q9UN67 800 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 CAPN6Q9Y6Q1 641 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 LTBP3Q9NS15 1303 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 PRR33A8MZF0 331 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 TSPAN15O95858 294 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 SLC7A5Q01650 507 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 DDR2Q16832 855 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 FYB2Q5VWT5 728 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 C6orf15Q6UXA7 325 aaPredicted RBP4.18□□□□□ -1.74
LRIF1-203ENST00000494675 PRR23BQ6ZRT6 265 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 TMEM192Q8IY95 271 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 DNAJB8Q8NHS0 232 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 PPP1R13LQ8WUF5 828 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 ATP13A1Q9HD20 1204 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 FAM86C1Q9NVL1 165 aa4.18□□□□□ -1.74
LRIF1-203ENST00000494675 SUCOQ9UBS9 1254 aaKnown RBP4.18□□□□□ -1.74
LRIF1-203ENST00000494675 ZNF214Q9UL59 606 aaPredicted RBP4.18□□□□□ -1.74
LRIF1-203ENST00000494675 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 TP53P04637 393 aaPredicted RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 PMS1P54277 932 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 BMS1Q14692 1282 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 NCAPHQ15003 741 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 NFE2L2Q16236 605 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 KIAA1211LQ6NV74 962 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 FAM178BQ8IXR5 827 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 MICAL1Q8TDZ2 1067 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 ZNF512BQ96KM6 892 aaPredicted RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 KREMEN1Q96MU8 473 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 SRPK1Q96SB4 655 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 MKRN2Q9H000 416 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 ZSWIM5Q9P217 1185 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 GJB6O95452 261 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 SERINC3Q13530 473 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 TDRD10Q5VZ19 366 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 CCDC144CPQ8IYA2 1237 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 ABHD4Q8TB40 342 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 PIWIL2Q8TC59 973 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 UBE2FQ969M7 185 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 NSUN3Q9H649 340 aaKnown RBP4.17□□□□□ -1.74
LRIF1-203ENST00000494675 SLAMF8Q9P0V8 285 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 ST14Q9Y5Y6 855 aa4.17□□□□□ -1.74
LRIF1-203ENST00000494675 RNF4P78317 190 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 NBPF12Q5TAG4 269 aaPredicted RBP4.16□□□□□ -1.74
LRIF1-203ENST00000494675 RNF141Q8WVD5 230 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 ALPK1Q96QP1 1244 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 DIRC2Q96SL1 478 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 ASPNQ9BXN1 380 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 KCNH3Q9ULD8 1083 aa4.16□□□□□ -1.74
LRIF1-203ENST00000494675 CDK11AQ9UQ88 783 aaPredicted RBP4.16□□□□□ -1.74
LRIF1-203ENST00000494675 B2RBV5 119 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 C9IYK1 514 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 TNK2Q07912 1038 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 EEPD1Q7L9B9 569 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 TMPRSS7Q7RTY8 843 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 AMIGO3Q86WK7 504 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 SMARCC1Q92922 1105 aaPredicted RBP4.15□□□□□ -1.74
LRIF1-203ENST00000494675 MKL1Q969V6 931 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 MRFAP1L1Q96HT8 127 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 DEPDC7Q96QD5 511 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 EPB41L4BQ9H329 900 aa4.15□□□□□ -1.74
LRIF1-203ENST00000494675 DCP1AQ9NPI6 582 aaPredicted RBP4.15□□□□□ -1.74
LRIF1-203ENST00000494675 TCAF2A6NFQ2 919 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 PDPK1O15530 556 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 C1QTNF9P0C862 333 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 CTSWP56202 376 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 AXDND1Q5T1B0 1012 aaPredicted RBP4.15□□□□□ -1.75
LRIF1-203ENST00000494675 HEATR6Q6AI08 1181 aaKnown RBP4.15□□□□□ -1.75
LRIF1-203ENST00000494675 PPFIBP1Q86W92 1011 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 KLHL6Q8WZ60 621 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 CCDC113Q9H0I3 377 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 TRIT1Q9H3H1 467 aaKnown RBP4.15□□□□□ -1.75
LRIF1-203ENST00000494675 SNTG2Q9NY99 539 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 FBXL21Q9UKT6 434 aa4.15□□□□□ -1.75
LRIF1-203ENST00000494675 LRRN2O75325 713 aa4.14□□□□□ -1.75
LRIF1-203ENST00000494675 IFRD2Q12894 506 aaPredicted RBP4.14□□□□□ -1.75
LRIF1-203ENST00000494675 AUHQ13825 339 aaKnown RBP4.14□□□□□ -1.75
LRIF1-203ENST00000494675 TCEAL1Q15170 157 aa4.14□□□□□ -1.75
LRIF1-203ENST00000494675 MTERF2Q49AM1 385 aa4.14□□□□□ -1.75
LRIF1-203ENST00000494675 DCAF15Q66K64 600 aa4.14□□□□□ -1.75
LRIF1-203ENST00000494675 LRP10Q7Z4F1 713 aa4.14□□□□□ -1.75
LRIF1-203ENST00000494675 ADAT2Q7Z6V5 191 aaKnown RBP4.14□□□□□ -1.75
LRIF1-203ENST00000494675 NOP9Q86U38 636 aaKnown RBP4.14□□□□□ -1.75
LRIF1-203ENST00000494675 CREG2Q8IUH2 290 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms