RNA–Protein interactions for RNA: ENST00000493470.2

ATRX-207, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 2,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-207ENST00000493470 RABGAP1Q9Y3P9 1069 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 ROBO2Q9HCK4 1378 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 SHANK3Q9BYB0 1731 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 SPATA31A3Q5VYP0 1347 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 ESYT3A0FGR9 886 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 VAMP4O75379 141 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 IGLV1-40P01703 118 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 RBM6P78332 1123 aaKnown RBP3.78□□□□□ -1.8
ATRX-207ENST00000493470 MAP2K1Q02750 393 aaPredicted RBP3.78□□□□□ -1.8
ATRX-207ENST00000493470 MCL1Q07820 350 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 HSP90AA2PQ14568 343 aaPredicted RBP3.78□□□□□ -1.8
ATRX-207ENST00000493470 SLC4A8Q2Y0W8 1093 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 ALFQ53S48 1182 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 BRINP3Q76B58 766 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 ANKRD13BQ86YJ7 626 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 ZNF654Q8IZM8 581 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 TMEM87BQ96K49 555 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 VTI1BQ9UEU0 232 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 RGS17Q9UGC6 210 aaPredicted RBP3.78□□□□□ -1.8
ATRX-207ENST00000493470 SMC3Q9UQE7 1217 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 RTL1A6NKG5 1358 aa3.78□□□□□ -1.8
ATRX-207ENST00000493470 CPSF1Q10570 1443 aaKnown RBP3.78□□□□□ -1.8
ATRX-207ENST00000493470 A0A1W2PNR3 127 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 PABPN1LA6NDY0 278 aaKnown RBP3.78□□□□□ -1.81
ATRX-207ENST00000493470 hCG_1984214I3L0E3 225 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 BACH1O14867 736 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 TREHO43280 583 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 KCNQ2O43526 872 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 PRPF40AO75400 957 aaKnown RBP3.78□□□□□ -1.81
ATRX-207ENST00000493470 MAP3K6O95382 1288 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 ATF3P18847 181 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 GJA8P48165 433 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 GP2P55259 537 aaKnown RBP3.78□□□□□ -1.81
ATRX-207ENST00000493470 HLTFQ14527 1009 aaKnown RBP eCLIP3.78□□□□□ -1.814e-8■■□□□ 11.5
ATRX-207ENST00000493470 SEPT2Q15019 361 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 KSR2Q6VAB6 950 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 STAG2Q8N3U4 1231 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 ATP8A1Q9Y2Q0 1164 aa3.78□□□□□ -1.81
ATRX-207ENST00000493470 ORC4O43929 436 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 PRNPP04156 253 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 HSP90AB1P08238 724 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 HOXC13P31276 330 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 SSR1P43307 286 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 EIF5P55010 431 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 MTMR3Q13615 1198 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 OCLNQ16625 522 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 SWI5Q1ZZU3 235 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 DALRD3Q5D0E6 543 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 HYIQ5T013 277 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 IQCEQ6IPM2 695 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 PLEKHM2Q8IWE5 1019 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 FMR1NBQ8N0W7 255 aaPredicted RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 LILRB2Q8N423 598 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 GIMAP7Q8NHV1 300 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 APPBP2Q92624 585 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 TBC1D20Q96BZ9 403 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 NELL2Q99435 816 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 TMEM63CQ9P1W3 806 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 IP6K2Q9UHH9 426 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 SMG6Q86US8 1419 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 DUOX1Q9NRD9 1551 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 TRIM64CA6NLI5 447 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 LILRB5O75023 590 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 LDHBP07195 334 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 CHMP4BP1P59074 171 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 TKFCQ3LXA3 575 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 KRT26Q7Z3Y9 468 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 VPS37DQ86XT2 251 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 MYO1HQ8N1T3 1032 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 NUDT16Q96DE0 195 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 TRMT2BQ96GJ1 504 aaKnown RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 PDGFDQ9GZP0 370 aaPredicted RBP3.77□□□□□ -1.81
ATRX-207ENST00000493470 TMEM51Q9NW97 253 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 RAI14Q9P0K7 980 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 TMCC3Q9ULS5 477 aa3.77□□□□□ -1.81
ATRX-207ENST00000493470 PIP5K1CO60331 668 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 KCNA2P16389 499 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 ITGB5P18084 799 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 ANKMY2Q8IV38 441 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 DEPDC4Q8N2C3 294 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 OGFOD1Q8N543 542 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 PPHLN1Q8NEY8 458 aaKnown RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 GAS2L2Q8NHY3 880 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 GTF3C2Q8WUA4 911 aaPredicted RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 JARID2Q92833 1246 aaPredicted RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 SKA1Q96BD8 255 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 NGLY1Q96IV0 654 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 FBXL18Q96ME1 805 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 RBCK1Q9BYM8 510 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 MRPL18Q9H0U6 180 aaKnown RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 RIC8AQ9NPQ8 531 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 SIRPGQ9P1W8 387 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 FBXO2Q9UK22 296 aaPredicted RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 DAAM1Q9Y4D1 1078 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 C10orf71Q711Q0 1435 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 CFAP65Q6ZU64 1925 aaKnown RBP3.76□□□□□ -1.81
ATRX-207ENST00000493470 TTC21AQ8NDW8 1320 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 ARFGEF2Q9Y6D5 1785 aa3.76□□□□□ -1.81
ATRX-207ENST00000493470 USP17L5A8MUK1 530 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms