RNA–Protein interactions for RNA: ENST00000493470.2

ATRX-207, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 2,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-207ENST00000493470 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
ATRX-207ENST00000493470 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
ATRX-207ENST00000493470 SENP3Q9H4L4 574 aaPredicted RBP12.43□□□□□ -0.42
ATRX-207ENST00000493470 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
ATRX-207ENST00000493470 FOXD1Q16676 465 aa11.28□□□□□ -0.6
ATRX-207ENST00000493470 POTEDQ86YR6 584 aa11.2□□□□□ -0.62
ATRX-207ENST00000493470 MSH5O43196 834 aa11.18□□□□□ -0.62
ATRX-207ENST00000493470 PLPPR3Q6T4P5 718 aa10.44□□□□□ -0.74
ATRX-207ENST00000493470 PIAS4Q8N2W9 510 aaPredicted RBP10.41□□□□□ -0.74
ATRX-207ENST00000493470 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
ATRX-207ENST00000493470 ADRA2BP18089 450 aa9.93□□□□□ -0.82
ATRX-207ENST00000493470 SCAF1Q9H7N4 1312 aaKnown RBP9.77□□□□□ -0.84
ATRX-207ENST00000493470 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
ATRX-207ENST00000493470 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
ATRX-207ENST00000493470 CACNB1Q02641 598 aaPredicted RBP9.47□□□□□ -0.89
ATRX-207ENST00000493470 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
ATRX-207ENST00000493470 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
ATRX-207ENST00000493470 RNF39Q9H2S5 420 aa9.28□□□□□ -0.92
ATRX-207ENST00000493470 MAPK8IP2Q13387 824 aaPredicted RBP9.15□□□□□ -0.94
ATRX-207ENST00000493470 RNF216Q9NWF9 866 aaPredicted RBP9.13□□□□□ -0.95
ATRX-207ENST00000493470 CNKSR2Q8WXI2 1034 aa9.06□□□□□ -0.96
ATRX-207ENST00000493470 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
ATRX-207ENST00000493470 DCAF8L1A6NGE4 600 aa8.83□□□□□ -1
ATRX-207ENST00000493470 NCBP3Q53F19 620 aaKnown RBP8.78□□□□□ -1
ATRX-207ENST00000493470 APLP2Q06481 763 aa8.73□□□□□ -1.01
ATRX-207ENST00000493470 POTEHQ6S545 545 aa8.72□□□□□ -1.01
ATRX-207ENST00000493470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.037e-8■■■□□ 16.2
ATRX-207ENST00000493470 DSG3P32926 999 aa8.46□□□□□ -1.06
ATRX-207ENST00000493470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.45□□□□□ -1.06
ATRX-207ENST00000493470 HNRNPUL2Q1KMD3 747 aaKnown RBP8.45□□□□□ -1.06
ATRX-207ENST00000493470 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
ATRX-207ENST00000493470 ZNF219Q9P2Y4 722 aaPredicted RBP8.37□□□□□ -1.07
ATRX-207ENST00000493470 U3KPZ7 1027 aaPredicted RBP8.32□□□□□ -1.08
ATRX-207ENST00000493470 CAPN15O75808 1086 aa8.25□□□□□ -1.09
ATRX-207ENST00000493470 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
ATRX-207ENST00000493470 NPM3O75607 178 aaKnown RBP8.24□□□□□ -1.09
ATRX-207ENST00000493470 ZBTB12Q9Y330 459 aaPredicted RBP8.12□□□□□ -1.11
ATRX-207ENST00000493470 SPINK5Q9NQ38 1064 aaPredicted RBP8.09□□□□□ -1.11
ATRX-207ENST00000493470 AKT1S1Q96B36 256 aa8.07□□□□□ -1.12
ATRX-207ENST00000493470 SP7Q8TDD2 431 aaPredicted RBP8.07□□□□□ -1.12
ATRX-207ENST00000493470 CHRDL2Q6WN34 429 aa8.04□□□□□ -1.12
ATRX-207ENST00000493470 CLCN6P51797 869 aa7.92□□□□□ -1.14
ATRX-207ENST00000493470 SLC4A2P04920 1241 aa7.92□□□□□ -1.14
ATRX-207ENST00000493470 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.15
ATRX-207ENST00000493470 TRHP20396 242 aaPredicted RBP7.9□□□□□ -1.15
ATRX-207ENST00000493470 FXR2P51116 673 aaKnown RBP eCLIP7.84□□□□□ -1.151e-9■□□□□ 9.7
ATRX-207ENST00000493470 ABCB7O75027 752 aa7.79□□□□□ -1.16
ATRX-207ENST00000493470 PIP4P2Q8N4L2 257 aa7.74□□□□□ -1.17
ATRX-207ENST00000493470 REM2Q8IYK8 340 aaPredicted RBP7.74□□□□□ -1.17
ATRX-207ENST00000493470 POLA2Q14181 598 aa7.7□□□□□ -1.18
ATRX-207ENST00000493470 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
ATRX-207ENST00000493470 SPDYE2BA6NHP3 402 aa7.62□□□□□ -1.19
ATRX-207ENST00000493470 SPDYE6P0CI01 402 aa7.62□□□□□ -1.19
ATRX-207ENST00000493470 SPDYE2Q495Y8 402 aa7.62□□□□□ -1.19
ATRX-207ENST00000493470 C19orf67A6NJJ6 358 aa7.6□□□□□ -1.19
ATRX-207ENST00000493470 HAX1O00165 279 aa7.6□□□□□ -1.19
ATRX-207ENST00000493470 PCDH10Q9P2E7 1040 aa7.58□□□□□ -1.2
ATRX-207ENST00000493470 PITPNM1O00562 1244 aa7.56□□□□□ -1.2
ATRX-207ENST00000493470 SPDYE1Q8NFV5 336 aaPredicted RBP7.56□□□□□ -1.2
ATRX-207ENST00000493470 LHX8Q68G74 356 aa7.51□□□□□ -1.21
ATRX-207ENST00000493470 FBLN2P98095 1184 aa7.5□□□□□ -1.21
ATRX-207ENST00000493470 KCNA4P22459 653 aa7.49□□□□□ -1.21
ATRX-207ENST00000493470 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
ATRX-207ENST00000493470 SSUH2Q9Y2M2 353 aa7.41□□□□□ -1.22
ATRX-207ENST00000493470 GABBR2O75899 941 aa7.4□□□□□ -1.23
ATRX-207ENST00000493470 OSCARQ8IYS5 282 aa7.38□□□□□ -1.23
ATRX-207ENST00000493470 PRKAR2AP13861 404 aaKnown RBP7.36□□□□□ -1.23
ATRX-207ENST00000493470 ZNF579Q8NAF0 562 aaKnown RBP7.26□□□□□ -1.25
ATRX-207ENST00000493470 EVX2Q03828 476 aa7.26□□□□□ -1.25
ATRX-207ENST00000493470 MAMSTRQ6ZN01 415 aa7.23□□□□□ -1.25
ATRX-207ENST00000493470 STAG3Q9UJ98 1225 aa7.23□□□□□ -1.25
ATRX-207ENST00000493470 ATF5Q9Y2D1 282 aaPredicted RBP7.22□□□□□ -1.25
ATRX-207ENST00000493470 PRR29P0C7W0 189 aa7.2□□□□□ -1.26
ATRX-207ENST00000493470 ZNF692Q9BU19 519 aaPredicted RBP7.2□□□□□ -1.26
ATRX-207ENST00000493470 SLC4A1APQ9BWU0 796 aaKnown RBP7.2□□□□□ -1.26
ATRX-207ENST00000493470 FARP1Q9Y4F1 1045 aaPredicted RBP7.14□□□□□ -1.27
ATRX-207ENST00000493470 CD44P16070 742 aaKnown RBP7.14□□□□□ -1.27
ATRX-207ENST00000493470 DCBLD2Q96PD2 775 aa7.14□□□□□ -1.27
ATRX-207ENST00000493470 POTEIP0CG38 1075 aa7.11□□□□□ -1.27
ATRX-207ENST00000493470 CLEC11AQ9Y240 323 aa7.11□□□□□ -1.27
ATRX-207ENST00000493470 PAK3O75914 559 aaPredicted RBP7.08□□□□□ -1.28
ATRX-207ENST00000493470 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATRX-207ENST00000493470 SLC39A7Q92504 469 aa7.05□□□□□ -1.28
ATRX-207ENST00000493470 C7P10643 843 aa7.05□□□□□ -1.28
ATRX-207ENST00000493470 MKRN4PQ13434 485 aaPredicted RBP7.02□□□□□ -1.29
ATRX-207ENST00000493470 PLSCR2Q9NRY7 297 aa7.01□□□□□ -1.29
ATRX-207ENST00000493470 PABPN1Q86U42 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATRX-207ENST00000493470 OTUD5Q96G74 571 aa6.98□□□□□ -1.29
ATRX-207ENST00000493470 POTEMA6NI47 508 aa6.97□□□□□ -1.29
ATRX-207ENST00000493470 ASTLQ6HA08 431 aaPredicted RBP6.97□□□□□ -1.29
ATRX-207ENST00000493470 ZRANB1Q9UGI0 708 aa6.95□□□□□ -1.3
ATRX-207ENST00000493470 POTEGQ6S5H5 508 aa6.93□□□□□ -1.3
ATRX-207ENST00000493470 SCUBE2Q9NQ36 999 aa6.92□□□□□ -1.3
ATRX-207ENST00000493470 CREBZFQ9NS37 354 aa6.92□□□□□ -1.3
ATRX-207ENST00000493470 CHADLQ6NUI6 762 aa6.9□□□□□ -1.3
ATRX-207ENST00000493470 SGIP1Q9BQI5 828 aa6.9□□□□□ -1.31
ATRX-207ENST00000493470 IER5LQ5T953 404 aa6.87□□□□□ -1.31
ATRX-207ENST00000493470 ATMINO43313 823 aaPredicted RBP6.84□□□□□ -1.32
ATRX-207ENST00000493470 TIE1P35590 1138 aa6.81□□□□□ -1.32
ATRX-207ENST00000493470 NISCHQ9Y2I1 1504 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms