RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 PRPF38AQ8NAV1 312 aaKnown RBP10.16□□□□□ -0.78
USP30-207ENST00000491362 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
USP30-207ENST00000491362 EPB41L4AQ9HCS5 686 aaPredicted RBP10.16□□□□□ -0.78
USP30-207ENST00000491362 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
USP30-207ENST00000491362 TRIOBPQ9H2D6 2365 aa10.16□□□□□ -0.78
USP30-207ENST00000491362 FRMPD3Q5JV73 1810 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 F5H6K3 240 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 MAGEA10P43363 369 aaPredicted RBP10.15□□□□□ -0.78
USP30-207ENST00000491362 OAZ1P54368 228 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 KLRC3Q07444 240 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 PLS1Q14651 629 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 KCTD2Q14681 263 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 SNX17Q15036 470 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 ZMYM1Q5SVZ6 1142 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 FAM83BQ5T0W9 1011 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 MAMDC4Q6UXC1 1216 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 IFNL3Q8IZI9 196 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 ZNF444Q8N0Y2 327 aaPredicted RBP10.15□□□□□ -0.78
USP30-207ENST00000491362 GMCL1P1Q8NEA9 526 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 SLF1Q9BQI6 1058 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 TEX13BQ9BXU2 312 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
USP30-207ENST00000491362 FBXO28Q9NVF7 368 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 MTMR4Q9NYA4 1195 aa10.15□□□□□ -0.78
USP30-207ENST00000491362 ZMYND8Q9ULU4 1186 aaPredicted RBP10.15□□□□□ -0.78
USP30-207ENST00000491362 RANBP2P49792 3224 aaKnown RBP10.15□□□□□ -0.78
USP30-207ENST00000491362 DNAJC25-GNG10A0A024R161 153 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 M0R2C6 588 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
USP30-207ENST00000491362 PLA2G6O60733 806 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 TTLL1O95922 423 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 NDUFB10O96000 172 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 SLC3A2P08195 630 aaKnown RBP10.14□□□□□ -0.79
USP30-207ENST00000491362 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
USP30-207ENST00000491362 MX1P20591 662 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 CNGA1P29973 690 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 TDO2P48775 406 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 PDE4BQ07343 736 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 MMP19Q99542 508 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 TINF2Q9BSI4 451 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 BCL11AQ9H165 835 aa10.14□□□□□ -0.79
USP30-207ENST00000491362 SYNGAP1Q96PV0 1343 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 KBTBD13C9JR72 458 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 SYN1P17600 705 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 NOVP48745 357 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 RRP1P56182 461 aaKnown RBP10.13□□□□□ -0.79
USP30-207ENST00000491362 HDAC1Q13547 482 aaPredicted RBP10.13□□□□□ -0.79
USP30-207ENST00000491362 CEP95Q96GE4 821 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 ANAPC4Q9UJX5 808 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 FEM1BQ9UK73 627 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 PHF24Q9UPV7 400 aa10.13□□□□□ -0.79
USP30-207ENST00000491362 ZBED4O75132 1171 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 APPP05067 770 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 FGRP09769 529 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 ZNF865P0CJ78 1059 aaPredicted RBP10.12□□□□□ -0.79
USP30-207ENST00000491362 PPARAQ07869 468 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 LRRC41Q15345 812 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 ALX1Q15699 326 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 E2F4Q16254 413 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 GJC2Q5T442 439 aaPredicted RBP10.12□□□□□ -0.79
USP30-207ENST00000491362 TSHZ3Q63HK5 1081 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 FAM109BQ6ICB4 259 aaPredicted RBP10.12□□□□□ -0.79
USP30-207ENST00000491362 SLC39A5Q6ZMH5 540 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 CHST13Q8NET6 341 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 TSEN34Q9BSV6 310 aaKnown RBP10.12□□□□□ -0.79
USP30-207ENST00000491362 FSD1Q9BTV5 496 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 UBE2OQ9C0C9 1292 aaKnown RBP10.12□□□□□ -0.79
USP30-207ENST00000491362 NAPBQ9H115 298 aa10.12□□□□□ -0.79
USP30-207ENST00000491362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
USP30-207ENST00000491362 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
USP30-207ENST00000491362 FOXP2O15409 715 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 PGK2P07205 417 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 TSPY3P0CV98 308 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 TSPY8P0CW00 308 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 RARBP10826 455 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 AKR1A1P14550 325 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 RTP1P59025 263 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 NKX3-2P78367 333 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 PRAMEF19Q5SWL8 479 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 SNRNP48Q6IEG0 339 aaKnown RBP10.11□□□□□ -0.79
USP30-207ENST00000491362 RNF180Q86T96 592 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 FAM160B2Q86V87 743 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 OTUD7AQ8TE49 926 aaPredicted RBP10.11□□□□□ -0.79
USP30-207ENST00000491362 LRCH3Q96II8 777 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
USP30-207ENST00000491362 HELLSQ9NRZ9 838 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 CNPY2Q9Y2B0 182 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 RIPK3Q9Y572 518 aa10.11□□□□□ -0.79
USP30-207ENST00000491362 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
USP30-207ENST00000491362 ZMYM6O95789 1325 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms