RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 SYNRGQ9UMZ2 1314 aa26.78■■□□□ 1.88
HOXA9-205ENST00000489695 BAZ2AQ9UIF9 1905 aaKnown RBP26.77■■□□□ 1.88
HOXA9-205ENST00000489695 PLXNA1Q9UIW2 1896 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 MOXD2PA6NHM9 499 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 DNAJB2P25686 324 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 UBE3CQ15386 1083 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 CTR9Q6PD62 1173 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 DDRGK1Q96HY6 314 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 BOLA2Q9H3K6 86 aa26.77■■□□□ 1.88
HOXA9-205ENST00000489695 DNAJC25-GNG10A0A024R161 153 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 SNAI1O95863 264 aaPredicted RBP26.76■■□□□ 1.87
HOXA9-205ENST00000489695 TIMP1P01033 207 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 CHGBP05060 677 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 SIRT2Q8IXJ6 389 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 HAUS7Q99871 368 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 TEX13BQ9BXU2 312 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 TBX21Q9UL17 535 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 FAM184BQ9ULE4 1060 aa26.76■■□□□ 1.87
HOXA9-205ENST00000489695 RAB11FIP3O75154 756 aa26.75■■□□□ 1.87
HOXA9-205ENST00000489695 KCNA10Q16322 511 aa26.75■■□□□ 1.87
HOXA9-205ENST00000489695 SLF1Q9BQI6 1058 aa26.75■■□□□ 1.87
HOXA9-205ENST00000489695 SLC4A4Q9Y6R1 1079 aa26.75■■□□□ 1.87
HOXA9-205ENST00000489695 DUSP11O75319 330 aaKnown RBP26.74■■□□□ 1.87
HOXA9-205ENST00000489695 HMMRO75330 724 aa26.74■■□□□ 1.87
HOXA9-205ENST00000489695 RCAN3Q9UKA8 241 aa26.74■■□□□ 1.87
HOXA9-205ENST00000489695 RIPK3Q9Y572 518 aa26.74■■□□□ 1.87
HOXA9-205ENST00000489695 CHD9Q3L8U1 2897 aa26.74■■□□□ 1.87
HOXA9-205ENST00000489695 ELP1O95163 1332 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 ATP2A1O14983 1001 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 RAD21O60216 631 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 CST5P28325 142 aaPredicted RBP26.73■■□□□ 1.87
HOXA9-205ENST00000489695 CDK7P50613 346 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 SNRNP48Q6IEG0 339 aaKnown RBP26.73■■□□□ 1.87
HOXA9-205ENST00000489695 MFSD5Q6N075 450 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 ZNF467Q7Z7K2 595 aaPredicted RBP26.73■■□□□ 1.87
HOXA9-205ENST00000489695 USP38Q8NB14 1042 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 ZNF576Q9H609 170 aa26.73■■□□□ 1.87
HOXA9-205ENST00000489695 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.72■■□□□ 1.87
HOXA9-205ENST00000489695 TIFAQ96CG3 184 aa26.72■■□□□ 1.87
HOXA9-205ENST00000489695 DDX11Q96FC9 970 aa26.72■■□□□ 1.87
HOXA9-205ENST00000489695 NUP88Q99567 741 aaPredicted RBP26.72■■□□□ 1.87
HOXA9-205ENST00000489695 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.72■■□□□ 1.87
HOXA9-205ENST00000489695 PUS7LQ9H0K6 701 aaKnown RBP26.72■■□□□ 1.87
HOXA9-205ENST00000489695 NYAP2Q9P242 653 aa26.72■■□□□ 1.87
HOXA9-205ENST00000489695 ARPP21Q9UBL0 812 aaPredicted RBP26.72■■□□□ 1.87
HOXA9-205ENST00000489695 MROH7Q68CQ1 1323 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 MYADML2A6NDP7 307 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 TJAP1Q5JTD0 557 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 C16orf59Q7L2K0 433 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 PRPF38AQ8NAV1 312 aaKnown RBP26.71■■□□□ 1.87
HOXA9-205ENST00000489695 GLT1D1Q96MS3 346 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 BCL11AQ9H165 835 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 ZBTB40Q9NUA8 1239 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 ZHX1Q9UKY1 873 aaPredicted RBP26.71■■□□□ 1.87
HOXA9-205ENST00000489695 DDX19BQ9UMR2 479 aa26.71■■□□□ 1.87
HOXA9-205ENST00000489695 GREB1LQ9C091 1923 aaPredicted RBP26.71■■□□□ 1.87
HOXA9-205ENST00000489695 F5H6K3 240 aa26.7■■□□□ 1.86
HOXA9-205ENST00000489695 KLRC3Q07444 240 aa26.7■■□□□ 1.86
HOXA9-205ENST00000489695 ACVR2BQ13705 512 aa26.7■■□□□ 1.86
HOXA9-205ENST00000489695 RASIP1Q5U651 963 aa26.7■■□□□ 1.86
HOXA9-205ENST00000489695 ADCY6O43306 1168 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 NDUFB10O96000 172 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 RASA1P20936 1047 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 PPIGQ13427 754 aaKnown RBP eCLIP26.69■■□□□ 1.86
HOXA9-205ENST00000489695 SBK1Q52WX2 424 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 TMEM240Q5SV17 173 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 ZSCAN25Q6NSZ9 544 aa26.69■■□□□ 1.86
HOXA9-205ENST00000489695 PCSK9Q8NBP7 692 aaKnown RBP26.69■■□□□ 1.86
HOXA9-205ENST00000489695 UPF3AQ9H1J1 476 aaKnown RBP26.69■■□□□ 1.86
HOXA9-205ENST00000489695 ASGR1P07306 291 aa26.68■■□□□ 1.86
HOXA9-205ENST00000489695 IRX5P78411 483 aaPredicted RBP26.68■■□□□ 1.86
HOXA9-205ENST00000489695 CCDC174Q6PII3 467 aa26.68■■□□□ 1.86
HOXA9-205ENST00000489695 ABHD16BQ9H3Z7 469 aa26.68■■□□□ 1.86
HOXA9-205ENST00000489695 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.68■■□□□ 1.86
HOXA9-205ENST00000489695 COG6Q9Y2V7 657 aa26.68■■□□□ 1.86
HOXA9-205ENST00000489695 C6orf222P0C671 652 aaPredicted RBP26.67■■□□□ 1.86
HOXA9-205ENST00000489695 GJA9P57773 515 aa26.67■■□□□ 1.86
HOXA9-205ENST00000489695 FGD4Q96M96 766 aa26.67■■□□□ 1.86
HOXA9-205ENST00000489695 STRBPQ96SI9 672 aaKnown RBP26.67■■□□□ 1.86
HOXA9-205ENST00000489695 ARVCFO00192 962 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 ZBED4O75132 1171 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 CCDC144BQ3MJ40 725 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 GIMAP6Q6P9H5 292 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 CPXCR1Q8N123 301 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 PBX4Q9BYU1 374 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 SPC25Q9HBM1 224 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 SLC38A10Q9HBR0 1119 aa26.66■■□□□ 1.86
HOXA9-205ENST00000489695 IGKV6D-41A0A0C4DH26 115 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 A0A0U1RQG5 324 aaPredicted RBP26.65■■□□□ 1.86
HOXA9-205ENST00000489695 GSG1L2A8MUP6 293 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 CSF2RAP15509 400 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 PBX2P40425 430 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 NKX3-2P78367 333 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 TMEM199Q8N511 208 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 CHMP4BQ9H444 224 aaKnown RBP26.65■■□□□ 1.86
HOXA9-205ENST00000489695 MKNK2Q9HBH9 465 aa26.65■■□□□ 1.86
HOXA9-205ENST00000489695 CTAGE5O15320 804 aa26.64■■□□□ 1.86
HOXA9-205ENST00000489695 GNASQ5JWF2 1037 aa26.64■■□□□ 1.86
HOXA9-205ENST00000489695 FAM126BQ8IXS8 530 aa26.64■■□□□ 1.86
HOXA9-205ENST00000489695 ANKRD35Q8N283 1001 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms