RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 TINF2Q9BSI4 451 aa21.76■■□□□ 1.07
ATG9A-222ENST00000488833 NRBP1Q9UHY1 535 aa21.76■■□□□ 1.07
ATG9A-222ENST00000488833 FEM1BQ9UK73 627 aa21.76■■□□□ 1.07
ATG9A-222ENST00000488833 ISY1Q9ULR0 285 aaKnown RBP21.76■■□□□ 1.07
ATG9A-222ENST00000488833 SYNPO2Q9UMS6 1093 aa21.76■■□□□ 1.07
ATG9A-222ENST00000488833 DIS3Q9Y2L1 958 aaKnown RBP21.76■■□□□ 1.07
ATG9A-222ENST00000488833 MDM2Q00987 491 aaPredicted RBP21.75■■□□□ 1.07
ATG9A-222ENST00000488833 TFAP4Q01664 338 aa21.75■■□□□ 1.07
ATG9A-222ENST00000488833 HDAC1Q13547 482 aaPredicted RBP21.75■■□□□ 1.07
ATG9A-222ENST00000488833 SLFN13Q68D06 897 aa21.75■■□□□ 1.07
ATG9A-222ENST00000488833 TDHQ8IZJ6 230 aa21.75■■□□□ 1.07
ATG9A-222ENST00000488833 CPXCR1Q8N123 301 aa21.75■■□□□ 1.07
ATG9A-222ENST00000488833 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
ATG9A-222ENST00000488833 RARBP10826 455 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 PDE1AP54750 535 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 LRRC41Q15345 812 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 EVI5LQ96CN4 794 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 RAVER2Q9HCJ3 691 aaKnown RBP21.74■■□□□ 1.07
ATG9A-222ENST00000488833 ATP11BQ9Y2G3 1177 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 RIPK3Q9Y572 518 aa21.74■■□□□ 1.07
ATG9A-222ENST00000488833 ATP2A1O14983 1001 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 FOXP2O15409 715 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 BMP3P12645 472 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 TAL1P17542 331 aaPredicted RBP21.73■■□□□ 1.07
ATG9A-222ENST00000488833 CTDSPL2Q05D32 466 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 SLC38A10Q9HBR0 1119 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 XPNPEP3Q9NQH7 507 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 PRKAG2Q9UGJ0 569 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 CNPY2Q9Y2B0 182 aa21.73■■□□□ 1.07
ATG9A-222ENST00000488833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
ATG9A-222ENST00000488833 DNAH12Q6ZR08 3092 aa21.72■■□□□ 1.07
ATG9A-222ENST00000488833 ADCYAP1R1P41586 468 aa21.72■■□□□ 1.07
ATG9A-222ENST00000488833 SLC39A5Q6ZMH5 540 aa21.72■■□□□ 1.07
ATG9A-222ENST00000488833 LBHD1Q9BQE6 289 aaPredicted RBP21.72■■□□□ 1.07
ATG9A-222ENST00000488833 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 TMEM232C9JQI7 657 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 IKQ13123 557 aaPredicted RBP21.71■■□□□ 1.07
ATG9A-222ENST00000488833 LRIT3Q3SXY7 679 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 PPP4R3BQ5MIZ7 849 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 VPS53Q5VIR6 699 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 FERMT2Q96AC1 680 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 CHMP4CQ96CF2 233 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 LTBP2Q14767 1821 aa21.71■■□□□ 1.07
ATG9A-222ENST00000488833 ZNF865P0CJ78 1059 aaPredicted RBP21.7■■□□□ 1.06
ATG9A-222ENST00000488833 AKR1A1P14550 325 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 SLC1A4P43007 532 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 TRIM60Q495X7 471 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 LENG1Q96BZ8 264 aaPredicted RBP21.7■■□□□ 1.06
ATG9A-222ENST00000488833 HELLSQ9NRZ9 838 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 FBXO40Q9UH90 709 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 STX8Q9UNK0 236 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 SYNGAP1Q96PV0 1343 aa21.7■■□□□ 1.06
ATG9A-222ENST00000488833 DNAJC25-GNG10A0A024R161 153 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 PGK1P00558 417 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 STAT2P52630 851 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 OAZ1P54368 228 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 RNF180Q86T96 592 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 ANKRD35Q8N283 1001 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 MSL3Q8N5Y2 521 aaKnown RBP21.69■■□□□ 1.06
ATG9A-222ENST00000488833 CHST13Q8NET6 341 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 GMCL1Q96IK5 515 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 LNPKQ9C0E8 428 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 INCENPQ9NQS7 918 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 PRDM5Q9NQX1 630 aaPredicted RBP21.69■■□□□ 1.06
ATG9A-222ENST00000488833 HOMER2Q9NSB8 354 aa21.69■■□□□ 1.06
ATG9A-222ENST00000488833 ZHX1Q9UKY1 873 aaPredicted RBP21.69■■□□□ 1.06
ATG9A-222ENST00000488833 MCM3APO60318 1980 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 A0A0D9SFI3 127 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 RANBP6O60518 1105 aaKnown RBP21.68■■□□□ 1.06
ATG9A-222ENST00000488833 NMT2O60551 498 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 MCCP23508 829 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 SNX17Q15036 470 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.68■■□□□ 1.06
ATG9A-222ENST00000488833 FAM160B2Q86V87 743 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 CHURC1Q8WUH1 139 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 FAM227BQ96M60 508 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 ANAPC4Q9UJX5 808 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 PHF24Q9UPV7 400 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 TACC3Q9Y6A5 838 aa21.68■■□□□ 1.06
ATG9A-222ENST00000488833 SNAI1O95863 264 aaPredicted RBP21.67■■□□□ 1.06
ATG9A-222ENST00000488833 FDX1P10109 184 aa21.67■■□□□ 1.06
ATG9A-222ENST00000488833 MAMDC4Q6UXC1 1216 aa21.67■■□□□ 1.06
ATG9A-222ENST00000488833 STAG1Q8WVM7 1258 aa21.67■■□□□ 1.06
ATG9A-222ENST00000488833 IL17RBQ9NRM6 502 aa21.67■■□□□ 1.06
ATG9A-222ENST00000488833 ORC4O43929 436 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 NMIQ13287 307 aaPredicted RBP21.66■■□□□ 1.06
ATG9A-222ENST00000488833 AAMPQ13685 434 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 ALX1Q15699 326 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 MCMDC2Q4G0Z9 681 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 GPR153Q6NV75 609 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 KCTD1Q719H9 257 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 ZNF467Q7Z7K2 595 aaPredicted RBP21.66■■□□□ 1.06
ATG9A-222ENST00000488833 ACAD9Q9H845 621 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 PDLIM7Q9NR12 457 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 TOMM22Q9NS69 142 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 FAM184BQ9ULE4 1060 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 MTMR7Q9Y216 660 aa21.66■■□□□ 1.06
ATG9A-222ENST00000488833 TRIM6-TRIM34B2RNG4 842 aa21.65■■□□□ 1.06
ATG9A-222ENST00000488833 C1orf53Q5VUE5 145 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms