RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 GJC2Q5T442 439 aaPredicted RBP26.83■■□□□ 1.89
PTPN4-211ENST00000488279 CPXCR1Q8N123 301 aa26.83■■□□□ 1.89
PTPN4-211ENST00000488279 ALPK3Q96L96 1907 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 BMP3P12645 472 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 MAGEA10P43363 369 aaPredicted RBP26.82■■□□□ 1.88
PTPN4-211ENST00000488279 SLC4A3P48751 1232 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 LNPKQ9C0E8 428 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 SLC38A10Q9HBR0 1119 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 RIPK3Q9Y572 518 aa26.82■■□□□ 1.88
PTPN4-211ENST00000488279 PARP14Q460N5 1801 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 TSPY2A6NKD2 308 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 KBTBD13C9JR72 458 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 CTDSPL2Q05D32 466 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 MCMDC2Q4G0Z9 681 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 VPS53Q5VIR6 699 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 DDX11Q96FC9 970 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 LAMA3Q16787 3333 aa26.81■■□□□ 1.88
PTPN4-211ENST00000488279 MYCNP04198 464 aaPredicted RBP26.8■■□□□ 1.88
PTPN4-211ENST00000488279 ATN1P54259 1190 aaPredicted RBP26.8■■□□□ 1.88
PTPN4-211ENST00000488279 ALX1Q15699 326 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 B4GALNT3Q6L9W6 998 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 SMC5Q8IY18 1101 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 INCENPQ9NQS7 918 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 ANAPC4Q9UJX5 808 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 ISY1Q9ULR0 285 aaKnown RBP26.8■■□□□ 1.88
PTPN4-211ENST00000488279 STX8Q9UNK0 236 aa26.8■■□□□ 1.88
PTPN4-211ENST00000488279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.8■■□□□ 1.88
PTPN4-211ENST00000488279 TRIM6-TRIM34B2RNG4 842 aa26.79■■□□□ 1.88
PTPN4-211ENST00000488279 FDX1P10109 184 aa26.79■■□□□ 1.88
PTPN4-211ENST00000488279 OAZ1P54368 228 aa26.79■■□□□ 1.88
PTPN4-211ENST00000488279 GMCL1Q96IK5 515 aa26.79■■□□□ 1.88
PTPN4-211ENST00000488279 FAM227BQ96M60 508 aa26.79■■□□□ 1.88
PTPN4-211ENST00000488279 RAVER2Q9HCJ3 691 aaKnown RBP26.79■■□□□ 1.88
PTPN4-211ENST00000488279 TMEM232C9JQI7 657 aa26.78■■□□□ 1.88
PTPN4-211ENST00000488279 RANBP6O60518 1105 aaKnown RBP26.78■■□□□ 1.88
PTPN4-211ENST00000488279 RARBP10826 455 aa26.78■■□□□ 1.88
PTPN4-211ENST00000488279 MSL3Q8N5Y2 521 aaKnown RBP26.78■■□□□ 1.88
PTPN4-211ENST00000488279 CHURC1Q8WUH1 139 aa26.78■■□□□ 1.88
PTPN4-211ENST00000488279 CNPY2Q9Y2B0 182 aa26.78■■□□□ 1.88
PTPN4-211ENST00000488279 COL11A1P12107 1806 aaPredicted RBP26.78■■□□□ 1.88
PTPN4-211ENST00000488279 MCCP23508 829 aa26.77■■□□□ 1.88
PTPN4-211ENST00000488279 SLC1A4P43007 532 aa26.77■■□□□ 1.88
PTPN4-211ENST00000488279 STAT2P52630 851 aa26.77■■□□□ 1.88
PTPN4-211ENST00000488279 UBE2OQ9C0C9 1292 aaKnown RBP26.77■■□□□ 1.88
PTPN4-211ENST00000488279 IL17RBQ9NRM6 502 aa26.77■■□□□ 1.88
PTPN4-211ENST00000488279 FBXO40Q9UH90 709 aa26.77■■□□□ 1.88
PTPN4-211ENST00000488279 DNAJC25-GNG10A0A024R161 153 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 A0A0D9SFI3 127 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 FGAP02671 866 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 TAL1P17542 331 aaPredicted RBP26.76■■□□□ 1.87
PTPN4-211ENST00000488279 IKQ13123 557 aaPredicted RBP26.76■■□□□ 1.87
PTPN4-211ENST00000488279 LRRC41Q15345 812 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 FAM160B2Q86V87 743 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 ANKRD35Q8N283 1001 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 CHST13Q8NET6 341 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 STAG1Q8WVM7 1258 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 RILPL2Q969X0 211 aa26.76■■□□□ 1.87
PTPN4-211ENST00000488279 ORC4O43929 436 aa26.75■■□□□ 1.87
PTPN4-211ENST00000488279 ZNF865P0CJ78 1059 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-211ENST00000488279 SLC39A5Q6ZMH5 540 aa26.75■■□□□ 1.87
PTPN4-211ENST00000488279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.75■■□□□ 1.87
PTPN4-211ENST00000488279 CHD1LQ86WJ1 897 aa26.75■■□□□ 1.87
PTPN4-211ENST00000488279 CHMP4CQ96CF2 233 aa26.75■■□□□ 1.87
PTPN4-211ENST00000488279 XPNPEP3Q9NQH7 507 aa26.75■■□□□ 1.87
PTPN4-211ENST00000488279 ZNFX1Q9P2E3 1918 aaKnown RBP26.75■■□□□ 1.87
PTPN4-211ENST00000488279 SYNGAP1Q96PV0 1343 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 NMT2O60551 498 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 PLA2G6O60733 806 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 IGHDP01880 384 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 FGRP09769 529 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 HSPD1P10809 573 aaKnown RBP26.74■■□□□ 1.87
PTPN4-211ENST00000488279 AKR1A1P14550 325 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 ADCYAP1R1P41586 468 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 RTP1P59025 263 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 NMIQ13287 307 aaPredicted RBP26.74■■□□□ 1.87
PTPN4-211ENST00000488279 RCSD1Q6JBY9 416 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 MAMDC4Q6UXC1 1216 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 ZNF467Q7Z7K2 595 aaPredicted RBP26.74■■□□□ 1.87
PTPN4-211ENST00000488279 TDHQ8IZJ6 230 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 TOMM22Q9NS69 142 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 PRKAG2Q9UGJ0 569 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 TACC3Q9Y6A5 838 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 FRMPD3Q5JV73 1810 aa26.74■■□□□ 1.87
PTPN4-211ENST00000488279 MYH4Q9Y623 1939 aa26.73■■□□□ 1.87
PTPN4-211ENST00000488279 SOX1O00570 391 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-211ENST00000488279 MDM2Q00987 491 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-211ENST00000488279 NUCB1Q02818 461 aa26.73■■□□□ 1.87
PTPN4-211ENST00000488279 RNF180Q86T96 592 aa26.73■■□□□ 1.87
PTPN4-211ENST00000488279 EXOC6Q8TAG9 804 aa26.73■■□□□ 1.87
PTPN4-211ENST00000488279 LBHD1Q9BQE6 289 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-211ENST00000488279 ATP11BQ9Y2G3 1177 aa26.73■■□□□ 1.87
PTPN4-211ENST00000488279 SNAI1O95863 264 aaPredicted RBP26.72■■□□□ 1.87
PTPN4-211ENST00000488279 KCTD1Q719H9 257 aa26.72■■□□□ 1.87
PTPN4-211ENST00000488279 FERMT2Q96AC1 680 aa26.72■■□□□ 1.87
PTPN4-211ENST00000488279 HOMER2Q9NSB8 354 aa26.72■■□□□ 1.87
PTPN4-211ENST00000488279 PGK1P00558 417 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 NOVP48745 357 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 MFAP1P55081 439 aaKnown RBP26.71■■□□□ 1.87
PTPN4-211ENST00000488279 RRP12Q5JTH9 1297 aaKnown RBP26.71■■□□□ 1.87
PTPN4-211ENST00000488279 ZNF589Q86UQ0 364 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms