RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 CPXCR1Q8N123 301 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 LRRC47Q8N1G4 583 aaKnown RBP14.53□□□□□ -0.08
VPS16-208ENST00000487461 GMCL1P1Q8NEA9 526 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 KIFC2Q96AC6 838 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 CRBNQ96SW2 442 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 NAPBQ9H115 298 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 RAVER2Q9HCJ3 691 aaKnown RBP14.53□□□□□ -0.08
VPS16-208ENST00000487461 INCENPQ9NQS7 918 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 DNAJC25-GNG10A0A024R161 153 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 FOXP2O15409 715 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 PGK1P00558 417 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 TSPY3P0CV98 308 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 TSPY8P0CW00 308 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 RARBP10826 455 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 PDE4BQ07343 736 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 LBHD1Q9BQE6 289 aaPredicted RBP14.52□□□□□ -0.09
VPS16-208ENST00000487461 SLC38A10Q9HBR0 1119 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 XPNPEP3Q9NQH7 507 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 SYNPO2Q9UMS6 1093 aa14.52□□□□□ -0.09
VPS16-208ENST00000487461 SNAI1O95863 264 aaPredicted RBP14.51□□□□□ -0.09
VPS16-208ENST00000487461 SLC3A2P08195 630 aaKnown RBP14.51□□□□□ -0.09
VPS16-208ENST00000487461 SNX17Q15036 470 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 TRIM60Q495X7 471 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 Q7L0L9 218 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 PRKAG2Q9UGJ0 569 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 PHF24Q9UPV7 400 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
VPS16-208ENST00000487461 TACC3Q9Y6A5 838 aa14.51□□□□□ -0.09
VPS16-208ENST00000487461 BMP3P12645 472 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 CTDSPL2Q05D32 466 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 MAMDC4Q6UXC1 1216 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 SH3RF1Q7Z6J0 888 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 MSL3Q8N5Y2 521 aaKnown RBP14.5□□□□□ -0.09
VPS16-208ENST00000487461 LENG1Q96BZ8 264 aaPredicted RBP14.5□□□□□ -0.09
VPS16-208ENST00000487461 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 IL17RBQ9NRM6 502 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 CNPY2Q9Y2B0 182 aa14.5□□□□□ -0.09
VPS16-208ENST00000487461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS16-208ENST00000487461 PLIN4Q96Q06 1357 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 SYNGAP1Q96PV0 1343 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 DNAH12Q6ZR08 3092 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 TMEM232C9JQI7 657 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 AKR1A1P14550 325 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 MCCP23508 829 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 PDE1AP54750 535 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 TLE2Q04725 743 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
VPS16-208ENST00000487461 C1orf53Q5VUE5 145 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.49□□□□□ -0.09
VPS16-208ENST00000487461 RNF180Q86T96 592 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 EVI5LQ96CN4 794 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 FGD4Q96M96 766 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 PRDM5Q9NQX1 630 aaPredicted RBP14.49□□□□□ -0.09
VPS16-208ENST00000487461 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
VPS16-208ENST00000487461 FAM184BQ9ULE4 1060 aa14.49□□□□□ -0.09
VPS16-208ENST00000487461 TRIM43BA6NCK2 446 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 NMT2O60551 498 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 ADAMTS4O75173 837 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 OAZ1P54368 228 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 ZNF467Q7Z7K2 595 aaPredicted RBP14.48□□□□□ -0.09
VPS16-208ENST00000487461 ANKRD35Q8N283 1001 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 CHST13Q8NET6 341 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 STAG1Q8WVM7 1258 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 BADQ92934 168 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 TRIM43Q96BQ3 446 aaPredicted RBP14.48□□□□□ -0.09
VPS16-208ENST00000487461 GMCL1Q96IK5 515 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 PDLIM7Q9NR12 457 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 MTMR10Q9NXD2 777 aa14.48□□□□□ -0.09
VPS16-208ENST00000487461 A0A1W2PQ45 241 aaPredicted RBP14.47□□□□□ -0.09
VPS16-208ENST00000487461 A0A1W2PQY0 241 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 TSPY2A6NKD2 308 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 FDX1P10109 184 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 SLC1A4P43007 532 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 STAT2P52630 851 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 SHHQ15465 462 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 ALX1Q15699 326 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 RCSD1Q6JBY9 416 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 KLHDC9Q8NEP7 349 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 AGBL1Q96MI9 1066 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 TSEN34Q9BSV6 310 aaKnown RBP14.47□□□□□ -0.09
VPS16-208ENST00000487461 HELLSQ9NRZ9 838 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.47□□□□□ -0.09
VPS16-208ENST00000487461 FBXO40Q9UH90 709 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 ZHX1Q9UKY1 873 aaPredicted RBP14.47□□□□□ -0.09
VPS16-208ENST00000487461 ISY1Q9ULR0 285 aaKnown RBP14.47□□□□□ -0.09
VPS16-208ENST00000487461 MYH4Q9Y623 1939 aa14.47□□□□□ -0.09
VPS16-208ENST00000487461 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.09
VPS16-208ENST00000487461 ZNF536O15090 1300 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms