RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 PPIGQ13427 754 aaKnown RBP eCLIP18.04■□□□□ 0.48
PFDN4-204ENST00000487129 MAMDC4Q6UXC1 1216 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 AACSQ86V21 672 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 FGD4Q96M96 766 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 GAS2L1Q99501 681 aaPredicted RBP18.04■□□□□ 0.48
PFDN4-204ENST00000487129 SH2D4AQ9H788 454 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
PFDN4-204ENST00000487129 CYP2D7A0A087X1C5 515 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 DUSP11O75319 330 aaKnown RBP18.03■□□□□ 0.48
PFDN4-204ENST00000487129 EEF2P13639 858 aaKnown RBP18.03■□□□□ 0.48
PFDN4-204ENST00000487129 SLFNL1Q499Z3 407 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 FAM126BQ8IXS8 530 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 MSL3Q8N5Y2 521 aaKnown RBP18.03■□□□□ 0.48
PFDN4-204ENST00000487129 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.03■□□□□ 0.48
PFDN4-204ENST00000487129 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
PFDN4-204ENST00000487129 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
PFDN4-204ENST00000487129 MYH8P13535 1937 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 CTAGE5O15320 804 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 ACRP10323 421 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 RLBP1P12271 317 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 CDK8P49336 464 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 MRPS5P82675 430 aaKnown RBP18.02■□□□□ 0.48
PFDN4-204ENST00000487129 MYO9BQ13459 2157 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 TTF1Q15361 905 aaPredicted RBP18.02■□□□□ 0.48
PFDN4-204ENST00000487129 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 CEP85Q6P2H3 762 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 CCDC17Q96LX7 622 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 UHRF1Q96T88 793 aaPredicted RBP18.02■□□□□ 0.48
PFDN4-204ENST00000487129 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
PFDN4-204ENST00000487129 ARMT1Q9H993 441 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 FAM184BQ9ULE4 1060 aa18.02■□□□□ 0.48
PFDN4-204ENST00000487129 YBX2Q9Y2T7 364 aaKnown RBP18.02■□□□□ 0.48
PFDN4-204ENST00000487129 ASGR1P07306 291 aa18.01■□□□□ 0.47
PFDN4-204ENST00000487129 FAM83BQ5T0W9 1011 aa18.01■□□□□ 0.47
PFDN4-204ENST00000487129 C12orf60Q5U649 245 aa18.01■□□□□ 0.47
PFDN4-204ENST00000487129 C16orf86Q6ZW13 317 aa18.01■□□□□ 0.47
PFDN4-204ENST00000487129 GLT1D1Q96MS3 346 aa18.01■□□□□ 0.47
PFDN4-204ENST00000487129 GREB1LQ9C091 1923 aaPredicted RBP18.01■□□□□ 0.47
PFDN4-204ENST00000487129 BAZ2AQ9UIF9 1905 aaKnown RBP18.01■□□□□ 0.47
PFDN4-204ENST00000487129 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 ARVCFO00192 962 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 CD4P01730 458 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 CHGBP05060 677 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 COPB2P35606 906 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
PFDN4-204ENST00000487129 PSRC1Q6PGN9 363 aaPredicted RBP18■□□□□ 0.47
PFDN4-204ENST00000487129 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
PFDN4-204ENST00000487129 HERVK_113Q902F9 699 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 NECAB3Q96P71 396 aaPredicted RBP18■□□□□ 0.47
PFDN4-204ENST00000487129 PPP1R12CQ9BZL4 782 aa18■□□□□ 0.47
PFDN4-204ENST00000487129 ZHX1Q9UKY1 873 aaPredicted RBP18■□□□□ 0.47
PFDN4-204ENST00000487129 GOLIM4O00461 696 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 MBD4O95243 580 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 GJA9P57773 515 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 NKX3-2P78367 333 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 ZNF467Q7Z7K2 595 aaPredicted RBP17.99■□□□□ 0.47
PFDN4-204ENST00000487129 TMEM199Q8N511 208 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.99■□□□□ 0.47
PFDN4-204ENST00000487129 VWCEQ96DN2 955 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
PFDN4-204ENST00000487129 TEX13BQ9BXU2 312 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 KATNBL1Q9H079 304 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 KANSL2Q9H9L4 492 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 IL1RAPL2Q9NP60 686 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 GBF1Q92538 1859 aa17.99■□□□□ 0.47
PFDN4-204ENST00000487129 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
PFDN4-204ENST00000487129 USP17L12C9JPN9 530 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 USP17L21D6R901 530 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 C6orf222P0C671 652 aaPredicted RBP17.98■□□□□ 0.47
PFDN4-204ENST00000487129 BMP1P13497 986 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 CYP2C18P33260 490 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 ACVR2BQ13705 512 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 SNRNP48Q6IEG0 339 aaKnown RBP17.98■□□□□ 0.47
PFDN4-204ENST00000487129 CCDC174Q6PII3 467 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 SLC43A3Q8NBI5 491 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 IL23AQ9NPF7 189 aa17.98■□□□□ 0.47
PFDN4-204ENST00000487129 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.98■□□□□ 0.47
PFDN4-204ENST00000487129 ATP2A1O14983 1001 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 IGFBP4P22692 258 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 ADD2P35612 726 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 RAB30Q15771 203 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
PFDN4-204ENST00000487129 RHPN1Q8TCX5 695 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 SLF1Q9BQI6 1058 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 MCM3APO60318 1980 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 ASTN1O14525 1302 aa17.97■□□□□ 0.47
PFDN4-204ENST00000487129 DNAJC2Q99543 621 aaKnown RBP17.96■□□□□ 0.47
PFDN4-204ENST00000487129 ABHD16BQ9H3Z7 469 aa17.96■□□□□ 0.47
PFDN4-204ENST00000487129 MSRAQ9UJ68 235 aa17.96■□□□□ 0.47
PFDN4-204ENST00000487129 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms