RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 SPATC1LQ9H0A9 340 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
APTX-228ENST00000486724 ABCF2Q9UG63 623 aa10.31□□□□□ -0.76
APTX-228ENST00000486724 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 F6X3S4 739 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 BCAR3O75815 825 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 FCER1AP12319 257 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 NBR1Q14596 966 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
APTX-228ENST00000486724 ASCL5Q7RTU5 278 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 ADHFE1Q8IWW8 467 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
APTX-228ENST00000486724 PHOSPHO2Q8TCD6 241 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 PBXIP1Q96AQ6 731 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 KAZALD1Q96I82 304 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 WNT8AQ9H1J5 351 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 DHX36Q9H2U1 1008 aaKnown RBP10.3□□□□□ -0.76
APTX-228ENST00000486724 DNAJC18Q9H819 358 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 MUTYHQ9UIF7 546 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 TECTAO75443 2155 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
APTX-228ENST00000486724 COL4A6Q14031 1691 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 MED19A0JLT2 244 aaPredicted RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 MYADML2A6NDP7 307 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 C6orf222P0C671 652 aaPredicted RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 IRS1P35568 1242 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 NCAPG2Q86XI2 1143 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 NEK9Q8TD19 979 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 EDAQ92838 391 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 NOC4LQ9BVI4 516 aaKnown RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 KIAA1683Q9H0B3 1180 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 SPC25Q9HBM1 224 aa10.29□□□□□ -0.76
APTX-228ENST00000486724 RIF1Q5UIP0 2472 aaKnown RBP10.29□□□□□ -0.76
APTX-228ENST00000486724 CHD6Q8TD26 2715 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 FAM186AA6NE01 2351 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 SOWAHBA6NEL2 793 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 PRR23AA6NEV1 266 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 TMEM221A6NGB7 291 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 H3BQ06 376 aaPredicted RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 M0R296 226 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 ACTN1P12814 892 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 MECOMQ03112 1051 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 SPRED2Q7Z698 418 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 METTL16Q86W50 562 aaKnown RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 HERC6Q8IVU3 1022 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 TEX11Q8IYF3 940 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 FBXL6Q8N531 539 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 MB21D1Q8N884 522 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 KLHDC4Q8TBB5 520 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 POP1Q99575 1024 aaKnown RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 ALG13Q9NP73 1137 aaKnown RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 FAM184BQ9ULE4 1060 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
APTX-228ENST00000486724 PDS5AQ29RF7 1337 aaKnown RBP10.28□□□□□ -0.76
APTX-228ENST00000486724 ALDH1L1O75891 902 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 GH2P01242 217 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 PHKA1P46020 1223 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 PLS1Q14651 629 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 COG2Q14746 738 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 ATP2B3Q16720 1220 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 TRIM67Q6ZTA4 783 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 FOXP4Q8IVH2 680 aaPredicted RBP10.27□□□□□ -0.77
APTX-228ENST00000486724 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
APTX-228ENST00000486724 VWCEQ96DN2 955 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 SCLYQ96I15 445 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
APTX-228ENST00000486724 DIS3Q9Y2L1 958 aaKnown RBP10.27□□□□□ -0.77
APTX-228ENST00000486724 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 PGK2P07205 417 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 LDHCP07864 332 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 GSTO1P78417 241 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 RASGRF1Q13972 1273 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 ZKSCAN2Q63HK3 967 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 ANKRD44Q8N8A2 993 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 SLC43A3Q8NBI5 491 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 ZNF384Q8TF68 577 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 CNTNAP3BQ96NU0 1288 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 MMP19Q99542 508 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 FSD1Q9BTV5 496 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 CNTNAP3Q9BZ76 1288 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 ZNFX1Q9P2E3 1918 aaKnown RBP10.26□□□□□ -0.77
APTX-228ENST00000486724 GVINP1Q7Z2Y8 2422 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 ZNF292O60281 2723 aa10.26□□□□□ -0.77
APTX-228ENST00000486724 COL11A1P12107 1806 aaPredicted RBP10.26□□□□□ -0.77
APTX-228ENST00000486724 EYA2O00167 538 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 GJA9P57773 515 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 IRX5P78411 483 aaPredicted RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms