RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ZNF444Q8N0Y2 327 aaPredicted RBP24.84■■□□□ 1.57
LMBR1-217ENST00000485985 EVI5LQ96CN4 794 aa24.84■■□□□ 1.57
LMBR1-217ENST00000485985 GUCD1Q96NT3 240 aa24.84■■□□□ 1.57
LMBR1-217ENST00000485985 SLF1Q9BQI6 1058 aa24.84■■□□□ 1.57
LMBR1-217ENST00000485985 ZNF287Q9HBT7 754 aa24.84■■□□□ 1.57
LMBR1-217ENST00000485985 MTMR4Q9NYA4 1195 aa24.84■■□□□ 1.57
LMBR1-217ENST00000485985 ADCYAP1R1P41586 468 aa24.83■■□□□ 1.57
LMBR1-217ENST00000485985 LRRC41Q15345 812 aa24.83■■□□□ 1.57
LMBR1-217ENST00000485985 FAM47AQ5JRC9 791 aa24.83■■□□□ 1.57
LMBR1-217ENST00000485985 VPS53Q5VIR6 699 aa24.83■■□□□ 1.57
LMBR1-217ENST00000485985 LRRC47Q8N1G4 583 aaKnown RBP24.83■■□□□ 1.57
LMBR1-217ENST00000485985 LAMA4Q16363 1823 aa24.83■■□□□ 1.57
LMBR1-217ENST00000485985 PDE4BQ07343 736 aa24.82■■□□□ 1.56
LMBR1-217ENST00000485985 TRIM60Q495X7 471 aa24.82■■□□□ 1.56
LMBR1-217ENST00000485985 NEDD1Q8NHV4 660 aa24.82■■□□□ 1.56
LMBR1-217ENST00000485985 MKL1Q969V6 931 aa24.82■■□□□ 1.56
LMBR1-217ENST00000485985 LNPKQ9C0E8 428 aa24.82■■□□□ 1.56
LMBR1-217ENST00000485985 PRDM5Q9NQX1 630 aaPredicted RBP24.82■■□□□ 1.56
LMBR1-217ENST00000485985 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.82■■□□□ 1.56
LMBR1-217ENST00000485985 TTLL1O95922 423 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 PGK2P07205 417 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 TSPY3P0CV98 308 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 TSPY8P0CW00 308 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 STAT3P40763 770 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 SHHQ15465 462 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 C1orf53Q5VUE5 145 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 SMC5Q8IY18 1101 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 FERMT2Q96AC1 680 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 FAM161BQ96MY7 647 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 MMP19Q99542 508 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 NRBP1Q9UHY1 535 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 TACC3Q9Y6A5 838 aa24.81■■□□□ 1.56
LMBR1-217ENST00000485985 A0A0D9SFI3 127 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 CTDSPL2Q05D32 466 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 AAMPQ13685 434 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 GMCL1P1Q8NEA9 526 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 BADQ92934 168 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 FAM227BQ96M60 508 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 SYNPO2Q9UMS6 1093 aa24.8■■□□□ 1.56
LMBR1-217ENST00000485985 TFAP4Q01664 338 aa24.79■■□□□ 1.56
LMBR1-217ENST00000485985 C9orf50Q5SZB4 431 aa24.79■■□□□ 1.56
LMBR1-217ENST00000485985 XPNPEP3Q9NQH7 507 aa24.79■■□□□ 1.56
LMBR1-217ENST00000485985 INCENPQ9NQS7 918 aa24.79■■□□□ 1.56
LMBR1-217ENST00000485985 PDLIM7Q9NR12 457 aa24.79■■□□□ 1.56
LMBR1-217ENST00000485985 SLC3A2P08195 630 aaKnown RBP24.78■■□□□ 1.56
LMBR1-217ENST00000485985 KCTD2Q14681 263 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 ZNF697Q5TEC3 545 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 SNRNP48Q6IEG0 339 aaKnown RBP24.78■■□□□ 1.56
LMBR1-217ENST00000485985 SH3RF1Q7Z6J0 888 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 PRPF38AQ8NAV1 312 aaKnown RBP24.78■■□□□ 1.56
LMBR1-217ENST00000485985 EXOC6Q8TAG9 804 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 TINF2Q9BSI4 451 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 TEX13BQ9BXU2 312 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 HELLSQ9NRZ9 838 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 PHF24Q9UPV7 400 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 DIS3Q9Y2L1 958 aaKnown RBP24.78■■□□□ 1.56
LMBR1-217ENST00000485985 RIPK3Q9Y572 518 aa24.78■■□□□ 1.56
LMBR1-217ENST00000485985 TRIM43BA6NCK2 446 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 IGHDP01880 384 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 RARBP10826 455 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 COPB2P35606 906 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 TLE2Q04725 743 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 ZNF792Q3KQV3 632 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 B4GALNT3Q6L9W6 998 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 KIFC2Q96AC6 838 aa24.77■■□□□ 1.56
LMBR1-217ENST00000485985 TRIM43Q96BQ3 446 aaPredicted RBP24.77■■□□□ 1.56
LMBR1-217ENST00000485985 LCTP09848 1927 aa24.76■■□□□ 1.55
LMBR1-217ENST00000485985 NMT2O60551 498 aa24.76■■□□□ 1.55
LMBR1-217ENST00000485985 ZNF589Q86UQ0 364 aaPredicted RBP24.76■■□□□ 1.55
LMBR1-217ENST00000485985 ANAPC4Q9UJX5 808 aa24.76■■□□□ 1.55
LMBR1-217ENST00000485985 LRRC37A2A6NM11 1700 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 ATP2A1O14983 1001 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 TAL1P17542 331 aaPredicted RBP24.75■■□□□ 1.55
LMBR1-217ENST00000485985 NMIQ13287 307 aaPredicted RBP24.75■■□□□ 1.55
LMBR1-217ENST00000485985 SLFN13Q68D06 897 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 RASGRP2Q7LDG7 609 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 RNF180Q86T96 592 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.75■■□□□ 1.55
LMBR1-217ENST00000485985 RWDD1Q9H446 243 aaPredicted RBP24.75■■□□□ 1.55
LMBR1-217ENST00000485985 SLC38A10Q9HBR0 1119 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 IL17RBQ9NRM6 502 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 FEM1BQ9UK73 627 aa24.75■■□□□ 1.55
LMBR1-217ENST00000485985 LAMA2P24043 3122 aaKnown RBP24.75■■□□□ 1.55
LMBR1-217ENST00000485985 PGK1P00558 417 aa24.74■■□□□ 1.55
LMBR1-217ENST00000485985 ZNF865P0CJ78 1059 aaPredicted RBP24.74■■□□□ 1.55
LMBR1-217ENST00000485985 BMP3P12645 472 aa24.74■■□□□ 1.55
LMBR1-217ENST00000485985 ALX1Q15699 326 aa24.74■■□□□ 1.55
LMBR1-217ENST00000485985 CPXCR1Q8N123 301 aa24.74■■□□□ 1.55
LMBR1-217ENST00000485985 RAVER2Q9HCJ3 691 aaKnown RBP24.74■■□□□ 1.55
LMBR1-217ENST00000485985 TSPY2A6NKD2 308 aa24.73■■□□□ 1.55
LMBR1-217ENST00000485985 MCMDC2Q4G0Z9 681 aa24.73■■□□□ 1.55
LMBR1-217ENST00000485985 CHD1LQ86WJ1 897 aa24.73■■□□□ 1.55
LMBR1-217ENST00000485985 CHMP4CQ96CF2 233 aa24.73■■□□□ 1.55
LMBR1-217ENST00000485985 CDX2Q99626 313 aaPredicted RBP24.73■■□□□ 1.55
LMBR1-217ENST00000485985 COL25A1Q9BXS0 654 aaPredicted RBP24.73■■□□□ 1.55
LMBR1-217ENST00000485985 SEMA6BQ9H3T3 888 aa24.73■■□□□ 1.55
LMBR1-217ENST00000485985 ZMYM6O95789 1325 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 TRIM6-TRIM34B2RNG4 842 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 ORC4O43929 436 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 ZBED4O75132 1171 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms