RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 TRIM43Q96BQ3 446 aaPredicted RBP24.28■■□□□ 1.48
CHRD-215ENST00000485883 TEX13BQ9BXU2 312 aa24.28■■□□□ 1.48
CHRD-215ENST00000485883 PHF24Q9UPV7 400 aa24.28■■□□□ 1.48
CHRD-215ENST00000485883 ZFYP08048 801 aaPredicted RBP24.27■■□□□ 1.48
CHRD-215ENST00000485883 COPB2P35606 906 aa24.27■■□□□ 1.48
CHRD-215ENST00000485883 SHHQ15465 462 aa24.27■■□□□ 1.48
CHRD-215ENST00000485883 ZNF444Q8N0Y2 327 aaPredicted RBP24.27■■□□□ 1.48
CHRD-215ENST00000485883 CPXCR1Q8N123 301 aa24.27■■□□□ 1.48
CHRD-215ENST00000485883 CEP95Q96GE4 821 aa24.27■■□□□ 1.48
CHRD-215ENST00000485883 PLXNA1Q9UIW2 1896 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 PATL2C9JE40 543 aaKnown RBP24.26■■□□□ 1.47
CHRD-215ENST00000485883 TLE2Q04725 743 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 C1orf53Q5VUE5 145 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 IFNL3Q8IZI9 196 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 LRRC47Q8N1G4 583 aaKnown RBP24.26■■□□□ 1.47
CHRD-215ENST00000485883 PRPF38AQ8NAV1 312 aaKnown RBP24.26■■□□□ 1.47
CHRD-215ENST00000485883 FAM161BQ96MY7 647 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 PCDHB15Q9Y5E8 787 aa24.26■■□□□ 1.47
CHRD-215ENST00000485883 SNAI1O95863 264 aaPredicted RBP24.25■■□□□ 1.47
CHRD-215ENST00000485883 GNAT2P19087 354 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 ITGB8P26012 769 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 RNF180Q86T96 592 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 PI4K2BQ8TCG2 481 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 KIFC2Q96AC6 838 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 GUCD1Q96NT3 240 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 RAVER2Q9HCJ3 691 aaKnown RBP24.25■■□□□ 1.47
CHRD-215ENST00000485883 MTMR4Q9NYA4 1195 aa24.25■■□□□ 1.47
CHRD-215ENST00000485883 DNAJC25-GNG10A0A024R161 153 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 ADAMTS4O75173 837 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 AKR1A1P14550 325 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 MKL1Q969V6 931 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 DDX11Q96FC9 970 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 CNPY2Q9Y2B0 182 aa24.24■■□□□ 1.47
CHRD-215ENST00000485883 A0A1W2PQ45 241 aaPredicted RBP24.23■■□□□ 1.47
CHRD-215ENST00000485883 A0A1W2PQY0 241 aa24.23■■□□□ 1.47
CHRD-215ENST00000485883 ATP2A1O14983 1001 aa24.23■■□□□ 1.47
CHRD-215ENST00000485883 ZBED4O75132 1171 aa24.23■■□□□ 1.47
CHRD-215ENST00000485883 FAM109BQ6ICB4 259 aaPredicted RBP24.23■■□□□ 1.47
CHRD-215ENST00000485883 SLC38A10Q9HBR0 1119 aa24.23■■□□□ 1.47
CHRD-215ENST00000485883 TTC41PQ6P2S7 1318 aa24.22■■□□□ 1.47
CHRD-215ENST00000485883 TTLL1O95922 423 aa24.22■■□□□ 1.47
CHRD-215ENST00000485883 IRX5P78411 483 aaPredicted RBP24.22■■□□□ 1.47
CHRD-215ENST00000485883 FGD4Q96M96 766 aa24.22■■□□□ 1.47
CHRD-215ENST00000485883 SYNGAP1Q96PV0 1343 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 SLFN13Q68D06 897 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 MAMDC4Q6UXC1 1216 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 MSL3Q8N5Y2 521 aaKnown RBP24.21■■□□□ 1.47
CHRD-215ENST00000485883 NEDD1Q8NHV4 660 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 CHMP4CQ96CF2 233 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 FSD1Q9BTV5 496 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 ZNF287Q9HBT7 754 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 FEM1BQ9UK73 627 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 ZHX1Q9UKY1 873 aaPredicted RBP24.21■■□□□ 1.47
CHRD-215ENST00000485883 CTDP1Q9Y5B0 961 aaPredicted RBP24.21■■□□□ 1.47
CHRD-215ENST00000485883 MYH4Q9Y623 1939 aa24.21■■□□□ 1.47
CHRD-215ENST00000485883 SYNRGQ9UMZ2 1314 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 MYADML2A6NDP7 307 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 PQBP1O60828 265 aaKnown RBP24.2■■□□□ 1.46
CHRD-215ENST00000485883 CLTBP09497 229 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 GMCL1P1Q8NEA9 526 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 FAM184BQ9ULE4 1060 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 TACC3Q9Y6A5 838 aa24.2■■□□□ 1.46
CHRD-215ENST00000485883 PLIN4Q96Q06 1357 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 UNC80Q8N2C7 3258 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 ERC2O15083 957 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 ADCY6O43306 1168 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 TSPY3P0CV98 308 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 TSPY8P0CW00 308 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 EPHB4P54760 987 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 TFAP4Q01664 338 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 PPARAQ07869 468 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 ZMYM1Q5SVZ6 1142 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 CCDC129Q6ZRS4 1044 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 KLHDC9Q8NEP7 349 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 NACAP1Q9BZK3 213 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 NAPBQ9H115 298 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 INCENPQ9NQS7 918 aa24.19■■□□□ 1.46
CHRD-215ENST00000485883 FOXP2O15409 715 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 BMP3P12645 472 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 ACLYP53396 1101 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 KCNA10Q16322 511 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 LRRFIP1Q32MZ4 808 aaKnown RBP24.18■■□□□ 1.46
CHRD-215ENST00000485883 ZNF697Q5TEC3 545 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 CCSAPQ6IQ19 270 aaPredicted RBP24.18■■□□□ 1.46
CHRD-215ENST00000485883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.18■■□□□ 1.46
CHRD-215ENST00000485883 ZNF467Q7Z7K2 595 aaPredicted RBP24.18■■□□□ 1.46
CHRD-215ENST00000485883 ANKRD35Q8N283 1001 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 HOMER2Q9NSB8 354 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.18■■□□□ 1.46
CHRD-215ENST00000485883 SYNPO2Q9UMS6 1093 aa24.18■■□□□ 1.46
CHRD-215ENST00000485883 TMEM232C9JQI7 657 aa24.17■■□□□ 1.46
CHRD-215ENST00000485883 PDE4BQ07343 736 aa24.17■■□□□ 1.46
CHRD-215ENST00000485883 ACVR2BQ13705 512 aa24.17■■□□□ 1.46
CHRD-215ENST00000485883 TSEN34Q9BSV6 310 aaKnown RBP24.17■■□□□ 1.46
CHRD-215ENST00000485883 STARD7Q9NQZ5 370 aa24.17■■□□□ 1.46
CHRD-215ENST00000485883 ISY1Q9ULR0 285 aaKnown RBP24.17■■□□□ 1.46
CHRD-215ENST00000485883 EYSQ5T1H1 3165 aa24.17■■□□□ 1.46
CHRD-215ENST00000485883 KIAA0355O15063 1070 aa24.16■■□□□ 1.46
CHRD-215ENST00000485883 DUSP11O75319 330 aaKnown RBP24.16■■□□□ 1.46
CHRD-215ENST00000485883 FAAP100Q0VG06 881 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms