RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ZP2Q05996 745 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ZNF252P-AS1Q0IIN9 211 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 BIRC2Q13490 618 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 C4orf46Q504U0 113 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PPM1JQ5JR12 505 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 RNF187Q5TA31 235 aaPredicted RBP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ALG1LQ6GMV1 187 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ZNF280DQ6N043 979 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PRR23BQ6ZRT6 265 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 C12orf40Q86WS4 652 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 SENP7Q9BQF6 1050 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 TMX4Q9H1E5 349 aaPredicted RBP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 SSU72Q9NP77 194 aaKnown RBP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 GNL3LQ9NVN8 582 aaKnown RBP4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 SWAP70Q9UH65 585 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 CNTNAP4Q9C0A0 1308 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 ERCC6Q03468 1493 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PLA2R1Q13018 1463 aa4.99□□□□□ -1.61
PRPF38B-205ENST00000485810 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 TRPM1Q7Z4N2 1603 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 IQGAP3Q86VI3 1631 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 GOLIM4O00461 696 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 ZNF500O60304 480 aaPredicted RBP4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 TSPAN15O95858 294 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 EOMESO95936 686 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 RING1Q06587 406 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 KCNMB1Q16558 191 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 FBF1Q8TES7 1133 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 SCYL1Q96KG9 808 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 CARD11Q9BXL7 1154 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 CHMP4BQ9H444 224 aaKnown RBP4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 C12orf49Q9H741 205 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 GABBR1Q9UBS5 961 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 FRMD4BQ9Y2L6 1034 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 NUB1Q9Y5A7 615 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 PITPNM2Q9BZ72 1349 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 NEURL4Q96JN8 1562 aa4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 EIF2AK4Q9P2K8 1649 aaKnown RBP4.98□□□□□ -1.61
PRPF38B-205ENST00000485810 ANKRD33BA6NCL7 494 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 EPB41L2O43491 1005 aaKnown RBP4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 STK10O94804 968 aaKnown RBP4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 RAP1GAPP47736 663 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 PTPN11Q06124 597 aaPredicted RBP4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 ARHGAP27Q6ZUM4 889 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 ASB11Q8WXH4 323 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 ANP32BQ92688 251 aaKnown RBP4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 EMILIN2Q9BXX0 1053 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 KCNK12Q9HB15 430 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 FBXO9Q9UK97 447 aaPredicted RBP4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 PCDHA4Q9UN74 947 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 SPG7Q9UQ90 795 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 CCDC144AA2RUR9 1427 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 ERBINQ96RT1 1412 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 ARAP3Q8WWN8 1544 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 CDC42BPBQ9Y5S2 1711 aa4.97□□□□□ -1.61
PRPF38B-205ENST00000485810 DUOX2Q9NRD8 1548 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 UHRF1BP1LA0JNW5 1464 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 A2MP01023 1474 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 ST20-MTHFSA0A0A6YYL1 179 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 C1QTNF9P0C862 333 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 XPCQ01831 940 aaPredicted RBP4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 IKZF1Q13422 519 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 INPP5AQ14642 412 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 CCDC144BQ3MJ40 725 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 SYDE1Q6ZW31 735 aaPredicted RBP4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 NPAS4Q8IUM7 802 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 LRRC56Q8IYG6 542 aaPredicted RBP4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 TRIM44Q96DX7 344 aaPredicted RBP4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 PPP1R16BQ96T49 567 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 CEP44Q9C0F1 390 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 SRCIN1Q9C0H9 1055 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 SEMA3GQ9NS98 782 aa4.96□□□□□ -1.62
PRPF38B-205ENST00000485810 RNF17Q9BXT8 1623 aaKnown RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 ABCC2Q92887 1545 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 RTEL1-TNFRSF6BF6WH68 1400 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 BLMP54132 1417 aaPredicted RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 ATP2B1P20020 1258 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 CDK8P49336 464 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 GYS2P54840 703 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 RHBDL3P58872 404 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 HDAC1Q13547 482 aaPredicted RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 PCNX4Q63HM2 1172 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 LLGL2Q6P1M3 1020 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 LILRA6Q6PI73 481 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 RPS6KC1Q96S38 1066 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 DUSP9Q99956 384 aaKnown RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 PICK1Q9NRD5 415 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 LMCD1Q9NZU5 365 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 FAM8A1Q9UBU6 413 aa4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 TTF2Q9UNY4 1162 aaKnown RBP4.95□□□□□ -1.62
PRPF38B-205ENST00000485810 PTPRTO14522 1441 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 PLCH2O75038 1416 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 SCAPERQ9BY12 1400 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms