RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SALL3Q9BXA9 1300 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 FEM1BQ9UK73 627 aa20.4■□□□□ 0.86
SMC4-216ENST00000485645 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.86
SMC4-216ENST00000485645 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.86
SMC4-216ENST00000485645 PLIN4Q96Q06 1357 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 ATP2A1O14983 1001 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 RARBP10826 455 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 LRRC41Q15345 812 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 FAM47AQ5JRC9 791 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 SLC39A5Q6ZMH5 540 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 CPXCR1Q8N123 301 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
SMC4-216ENST00000485645 GMCL1P1Q8NEA9 526 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 DDX11Q96FC9 970 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.85
SMC4-216ENST00000485645 PRKAG2Q9UGJ0 569 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 ATP11BQ9Y2G3 1177 aa20.39■□□□□ 0.85
SMC4-216ENST00000485645 TFAP4Q01664 338 aa20.38■□□□□ 0.85
SMC4-216ENST00000485645 SLFN13Q68D06 897 aa20.38■□□□□ 0.85
SMC4-216ENST00000485645 SLC38A10Q9HBR0 1119 aa20.38■□□□□ 0.85
SMC4-216ENST00000485645 RIPK3Q9Y572 518 aa20.38■□□□□ 0.85
SMC4-216ENST00000485645 BMP3P12645 472 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 ADCYAP1R1P41586 468 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 GPR153Q6NV75 609 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 CCDC129Q6ZRS4 1044 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 MSL3Q8N5Y2 521 aaKnown RBP20.37■□□□□ 0.85
SMC4-216ENST00000485645 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 RAVER2Q9HCJ3 691 aaKnown RBP20.37■□□□□ 0.85
SMC4-216ENST00000485645 XPNPEP3Q9NQH7 507 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
SMC4-216ENST00000485645 TAL1P17542 331 aaPredicted RBP20.36■□□□□ 0.85
SMC4-216ENST00000485645 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
SMC4-216ENST00000485645 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
SMC4-216ENST00000485645 RNF180Q86T96 592 aa20.36■□□□□ 0.85
SMC4-216ENST00000485645 FERMT2Q96AC1 680 aa20.36■□□□□ 0.85
SMC4-216ENST00000485645 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
SMC4-216ENST00000485645 TSPY2A6NKD2 308 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 ZNF865P0CJ78 1059 aaPredicted RBP20.35■□□□□ 0.85
SMC4-216ENST00000485645 FDX1P10109 184 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 AKR1A1P14550 325 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 OAZ1P54368 228 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 PDE1AP54750 535 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 CTDSPL2Q05D32 466 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 SNX17Q15036 470 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
SMC4-216ENST00000485645 SYNGAP1Q96PV0 1343 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 DNAJC25-GNG10A0A024R161 153 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 TMEM232C9JQI7 657 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 FOXP2O15409 715 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 STAT2P52630 851 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 C1orf53Q5VUE5 145 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMC4-216ENST00000485645 ANKRD35Q8N283 1001 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 CHST13Q8NET6 341 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
SMC4-216ENST00000485645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMC4-216ENST00000485645 PGK1P00558 417 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 SLC1A4P43007 532 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 IKQ13123 557 aaPredicted RBP20.33■□□□□ 0.85
SMC4-216ENST00000485645 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 MAMDC4Q6UXC1 1216 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 ZNF467Q7Z7K2 595 aaPredicted RBP20.33■□□□□ 0.85
SMC4-216ENST00000485645 FAM160B2Q86V87 743 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 CHURC1Q8WUH1 139 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 PRDM5Q9NQX1 630 aaPredicted RBP20.33■□□□□ 0.85
SMC4-216ENST00000485645 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 STX8Q9UNK0 236 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 PHF24Q9UPV7 400 aa20.33■□□□□ 0.85
SMC4-216ENST00000485645 SNAI1O95863 264 aaPredicted RBP20.32■□□□□ 0.84
SMC4-216ENST00000485645 MCCP23508 829 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 VPS53Q5VIR6 699 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 DEFB123Q8N688 67 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 INCENPQ9NQS7 918 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 ANAPC4Q9UJX5 808 aa20.32■□□□□ 0.84
SMC4-216ENST00000485645 ZHX1Q9UKY1 873 aaPredicted RBP20.32■□□□□ 0.84
SMC4-216ENST00000485645 AAMPQ13685 434 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 ALX1Q15699 326 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 TICAM2Q86XR7 235 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 LENG1Q96BZ8 264 aaPredicted RBP20.31■□□□□ 0.84
SMC4-216ENST00000485645 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 HOMER2Q9NSB8 354 aa20.31■□□□□ 0.84
SMC4-216ENST00000485645 RANBP6O60518 1105 aaKnown RBP20.3■□□□□ 0.84
SMC4-216ENST00000485645 ADAMTS4O75173 837 aa20.3■□□□□ 0.84
SMC4-216ENST00000485645 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
SMC4-216ENST00000485645 RCSD1Q6JBY9 416 aa20.3■□□□□ 0.84
SMC4-216ENST00000485645 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
SMC4-216ENST00000485645 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
SMC4-216ENST00000485645 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.3■□□□□ 0.84
SMC4-216ENST00000485645 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
SMC4-216ENST00000485645 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 ORC4O43929 436 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 NMT2O60551 498 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 PLA2G6O60733 806 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 TLE2Q04725 743 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 ACVR2BQ13705 512 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms