RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 LRRC47Q8N1G4 583 aaKnown RBP22.94■■□□□ 1.26
COL27A1-205ENST00000485397 MKL1Q969V6 931 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 KIFC2Q96AC6 838 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 LENG1Q96BZ8 264 aaPredicted RBP22.94■■□□□ 1.26
COL27A1-205ENST00000485397 FSD1Q9BTV5 496 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 ZNF287Q9HBT7 754 aa22.94■■□□□ 1.26
COL27A1-205ENST00000485397 ZBED4O75132 1171 aa22.93■■□□□ 1.26
COL27A1-205ENST00000485397 SH3RF1Q7Z6J0 888 aa22.93■■□□□ 1.26
COL27A1-205ENST00000485397 DDX11Q96FC9 970 aa22.93■■□□□ 1.26
COL27A1-205ENST00000485397 RAVER2Q9HCJ3 691 aaKnown RBP22.93■■□□□ 1.26
COL27A1-205ENST00000485397 PHF24Q9UPV7 400 aa22.93■■□□□ 1.26
COL27A1-205ENST00000485397 PLXNA1Q9UIW2 1896 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 TTLL1O95922 423 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 ZMYM1Q5SVZ6 1142 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 NEDD1Q8NHV4 660 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 NACAP1Q9BZK3 213 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 PDLIM7Q9NR12 457 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 CNPY2Q9Y2B0 182 aa22.92■■□□□ 1.26
COL27A1-205ENST00000485397 CTDP1Q9Y5B0 961 aaPredicted RBP22.92■■□□□ 1.26
COL27A1-205ENST00000485397 TRIM43BA6NCK2 446 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 ATP2A1O14983 1001 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 SNAI1O95863 264 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-205ENST00000485397 TSPY3P0CV98 308 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 TSPY8P0CW00 308 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 AKR1A1P14550 325 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 TLE2Q04725 743 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 C1orf53Q5VUE5 145 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 SLFN13Q68D06 897 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 RNF180Q86T96 592 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 BADQ92934 168 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 TRIM43Q96BQ3 446 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-205ENST00000485397 NAPBQ9H115 298 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 SLC38A10Q9HBR0 1119 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 FEM1BQ9UK73 627 aa22.91■■□□□ 1.26
COL27A1-205ENST00000485397 LTBP2Q14767 1821 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 DNAJC25-GNG10A0A024R161 153 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 MX1P20591 662 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 TFAP4Q01664 338 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 PDE4BQ07343 736 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 PPARAQ07869 468 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 GMCL1P1Q8NEA9 526 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 MYH4Q9Y623 1939 aa22.9■■□□□ 1.26
COL27A1-205ENST00000485397 ADAMTS4O75173 837 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 BMP3P12645 472 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 SHHQ15465 462 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 C9orf50Q5SZB4 431 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 CCDC129Q6ZRS4 1044 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 MSL3Q8N5Y2 521 aaKnown RBP22.89■■□□□ 1.25
COL27A1-205ENST00000485397 CHMP4CQ96CF2 233 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 ZHX1Q9UKY1 873 aaPredicted RBP22.89■■□□□ 1.25
COL27A1-205ENST00000485397 SYNPO2Q9UMS6 1093 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 STXBP5LQ9Y2K9 1186 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 PLIN4Q96Q06 1357 aa22.89■■□□□ 1.25
COL27A1-205ENST00000485397 SYNGAP1Q96PV0 1343 aa22.88■■□□□ 1.25
COL27A1-205ENST00000485397 A0A1W2PQ45 241 aaPredicted RBP22.88■■□□□ 1.25
COL27A1-205ENST00000485397 A0A1W2PQY0 241 aa22.88■■□□□ 1.25
COL27A1-205ENST00000485397 POTEB2H3BUK9 544 aa22.88■■□□□ 1.25
COL27A1-205ENST00000485397 SLC3A2P08195 630 aaKnown RBP22.88■■□□□ 1.25
COL27A1-205ENST00000485397 MAMDC4Q6UXC1 1216 aa22.88■■□□□ 1.25
COL27A1-205ENST00000485397 FAM184BQ9ULE4 1060 aa22.88■■□□□ 1.25
COL27A1-205ENST00000485397 TMEM232C9JQI7 657 aa22.87■■□□□ 1.25
COL27A1-205ENST00000485397 FOXP2O15409 715 aa22.87■■□□□ 1.25
COL27A1-205ENST00000485397 ANKRD35Q8N283 1001 aa22.87■■□□□ 1.25
COL27A1-205ENST00000485397 FGD4Q96M96 766 aa22.87■■□□□ 1.25
COL27A1-205ENST00000485397 INCENPQ9NQS7 918 aa22.87■■□□□ 1.25
COL27A1-205ENST00000485397 ISY1Q9ULR0 285 aaKnown RBP22.87■■□□□ 1.25
COL27A1-205ENST00000485397 SALL3Q9BXA9 1300 aa22.86■■□□□ 1.25
COL27A1-205ENST00000485397 ITGB8P26012 769 aa22.86■■□□□ 1.25
COL27A1-205ENST00000485397 CTDSPL2Q05D32 466 aa22.86■■□□□ 1.25
COL27A1-205ENST00000485397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL27A1-205ENST00000485397 ZNF467Q7Z7K2 595 aaPredicted RBP22.86■■□□□ 1.25
COL27A1-205ENST00000485397 KLHDC9Q8NEP7 349 aa22.86■■□□□ 1.25
COL27A1-205ENST00000485397 CHST13Q8NET6 341 aa22.86■■□□□ 1.25
COL27A1-205ENST00000485397 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.86■■□□□ 1.25
COL27A1-205ENST00000485397 SYNRGQ9UMZ2 1314 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 DNAH12Q6ZR08 3092 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 PQBP1O60828 265 aaKnown RBP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 CLTBP09497 229 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 OAZ1P54368 228 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 IRX5P78411 483 aaPredicted RBP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 ACVR2BQ13705 512 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 ANKRD45Q5TZF3 282 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 FAM109BQ6ICB4 259 aaPredicted RBP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 FAM161BQ96MY7 647 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 TSEN34Q9BSV6 310 aaKnown RBP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 HOMER2Q9NSB8 354 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 FBXO40Q9UH90 709 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.85■■□□□ 1.25
COL27A1-205ENST00000485397 TACC3Q9Y6A5 838 aa22.85■■□□□ 1.25
COL27A1-205ENST00000485397 MYADML2A6NDP7 307 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 DLL1O00548 723 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 MCCP23508 829 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 ACLYP53396 1101 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 GUCD1Q96NT3 240 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 CRBNQ96SW2 442 aa22.84■■□□□ 1.25
COL27A1-205ENST00000485397 ADCY6O43306 1168 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 NMT2O60551 498 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 SLC1A4P43007 532 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 STAT2P52630 851 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms