RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 NPLOC4Q8TAT6 608 aa16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 RUFY2Q8WXA3 655 aa16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 DDX20Q9UHI6 824 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
LDLRAP1-205ENST00000484476 ZMYM6O95789 1325 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 ESR2Q92731 530 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 MTMR7Q9Y216 660 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 DOCK3Q8IZD9 2030 aa16.46■□□□□ 0.23
LDLRAP1-205ENST00000484476 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 COBLO75128 1261 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 HAND2P61296 217 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 CCDC96Q2M329 555 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 TTC14Q96N46 770 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 NRBP1Q9UHY1 535 aa16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
LDLRAP1-205ENST00000484476 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 FGRP09769 529 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 ZNF589Q86UQ0 364 aaPredicted RBP16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 MAML3Q96JK9 1138 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 RAVER2Q9HCJ3 691 aaKnown RBP16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
LDLRAP1-205ENST00000484476 FOXP2O15409 715 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 SEPT4O43236 478 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 PLA2G6O60733 806 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 PGK2P07205 417 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 LHX8Q68G74 356 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 DIS3LQ8TF46 1054 aaKnown RBP16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 PNMA2Q9UL42 364 aa16.43■□□□□ 0.22
LDLRAP1-205ENST00000484476 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 NMT2O60551 498 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 TKFCQ3LXA3 575 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
LDLRAP1-205ENST00000484476 DNM1LO00429 736 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 RARBP10826 455 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 CYBAP13498 195 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 C7orf61Q8IZ16 206 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 KRT23Q9C075 422 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 ACAD9Q9H845 621 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
LDLRAP1-205ENST00000484476 BRCA2P51587 3418 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 TRDNQ13061 729 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 COLQQ9Y215 455 aaPredicted RBP16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
LDLRAP1-205ENST00000484476 ALAS1P13196 640 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 RNF180Q86T96 592 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 DGKHQ86XP1 1220 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 UBAC1Q9BSL1 405 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 CCPG1Q9ULG6 757 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
LDLRAP1-205ENST00000484476 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 MKI67P46013 3256 aaKnown RBP16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 AKR1A1P14550 325 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 RNF146Q9NTX7 359 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 PFASO15067 1338 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 RAD50Q92878 1312 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
LDLRAP1-205ENST00000484476 KDM4AO75164 1064 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms