RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 ZKSCAN3Q9BRR0 538 aa26.08■■□□□ 1.77
CNTNAP3B-208ENST00000484254 ZSWIM5Q9P217 1185 aa26.08■■□□□ 1.77
CNTNAP3B-208ENST00000484254 ISY1Q9ULR0 285 aaKnown RBP26.08■■□□□ 1.77
CNTNAP3B-208ENST00000484254 ZBED4O75132 1171 aa26.07■■□□□ 1.76
CNTNAP3B-208ENST00000484254 MLLT1Q03111 559 aaPredicted RBP26.07■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CHMP4CQ96CF2 233 aa26.07■■□□□ 1.76
CNTNAP3B-208ENST00000484254 SLC38A10Q9HBR0 1119 aa26.07■■□□□ 1.76
CNTNAP3B-208ENST00000484254 KIAA0100Q14667 2235 aaKnown RBP26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ATP2A1O14983 1001 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 HOXC6P09630 235 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 FDX1P10109 184 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 EN2P19622 333 aaPredicted RBP26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 COPB2P35606 906 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 KCTD1Q719H9 257 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ABRAQ8N0Z2 381 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 TEX13BQ9BXU2 312 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 RNF208Q9H0X6 261 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 UNC93B1Q9H1C4 597 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 MTMR7Q9Y216 660 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CTDP1Q9Y5B0 961 aaPredicted RBP26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ZNF236Q9UL36 1845 aa26.06■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ZKSCAN1P17029 563 aaPredicted RBP26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 IKQ13123 557 aaPredicted RBP26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 RASGRP2Q7LDG7 609 aa26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ANKS1AQ92625 1134 aa26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ZSCAN10Q96SZ4 725 aaPredicted RBP26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 LSG1Q9H089 658 aaKnown RBP26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 RBM8AQ9Y5S9 174 aaKnown RBP26.05■■□□□ 1.76
CNTNAP3B-208ENST00000484254 GJB1P08034 283 aa26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ADORA2AP29274 412 aa26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 OAZ1P54368 228 aa26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CCL14Q16627 93 aa26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CCDC96Q2M329 555 aa26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 SNRNP48Q6IEG0 339 aaKnown RBP26.04■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CDC45O75419 566 aa26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 FCER1AP12319 257 aa26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 TRIM32Q13049 653 aa26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 TRDNQ13061 729 aa26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CPXCR1Q8N123 301 aa26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 ENAHQ8N8S7 591 aaPredicted RBP26.03■■□□□ 1.76
CNTNAP3B-208ENST00000484254 E7EWF7 191 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 PDHBP11177 359 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 MAP3K21Q5TCX8 1036 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 CASC1Q6TDU7 716 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 DPP9Q86TI2 863 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 NPLOC4Q8TAT6 608 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 UBAC1Q9BSL1 405 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 RAVER2Q9HCJ3 691 aaKnown RBP26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 TAF6LQ9Y6J9 622 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 TNKSO95271 1327 aa26.02■■□□□ 1.76
CNTNAP3B-208ENST00000484254 SNHG28P0DPA3 235 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 GJA8P48165 433 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 BTNL9Q6UXG8 535 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 CYB5R4Q7L1T6 521 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 RPTORQ8N122 1335 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 MMP19Q99542 508 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 ANO2Q9NQ90 1003 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 PAK6Q9NQU5 681 aaPredicted RBP26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 FLRT1Q9NZU1 646 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 PRR12Q9ULL5 1215 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 RIPK3Q9Y572 518 aa26.01■■□□□ 1.75
CNTNAP3B-208ENST00000484254 COBLO75128 1261 aa26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 PRKAR2AP13861 404 aaKnown RBP26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 KCTD2Q14681 263 aa26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 PNMA1Q8ND90 353 aa26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 XRN2Q9H0D6 950 aaKnown RBP eCLIP26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 KAT14Q9H8E8 782 aa26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 HMX1Q9NP08 348 aaPredicted RBP26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SLC5A4Q9NY91 659 aa26■■□□□ 1.75
CNTNAP3B-208ENST00000484254 FRMPD2Q68DX3 1309 aaPredicted RBP25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 ZNF543Q08ER8 600 aa25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 TTBK2Q6IQ55 1244 aa25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 STOX1Q6ZVD7 989 aa25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 RALYLQ86SE5 291 aaKnown RBP25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 NCOA7Q8NI08 942 aa25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 GPCPD1Q9NPB8 672 aa25.99■■□□□ 1.75
CNTNAP3B-208ENST00000484254 IGHA2P01877 340 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SLC16A2P36021 539 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SLC4A3P48751 1232 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 CACNB2Q08289 660 aaPredicted RBP25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SEC23AQ15436 765 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 MFSD14CQ5VZR4 134 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 OLFML2BQ68BL8 750 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 U2AF1L4Q8WU68 220 aaKnown RBP25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SHISA4Q96DD7 197 aa25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 ZNFX1Q9P2E3 1918 aaKnown RBP25.98■■□□□ 1.75
CNTNAP3B-208ENST00000484254 ZNF536O15090 1300 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SGPL1O95470 568 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 NECTIN1Q15223 517 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SYDE2Q5VT97 1194 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 CHST13Q8NET6 341 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 DEFB118Q96PH6 123 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 FBXO40Q9UH90 709 aa25.97■■□□□ 1.75
CNTNAP3B-208ENST00000484254 CAPN2P17655 700 aa25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SNAP25P60880 206 aa25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 GPATCH4Q5T3I0 446 aaKnown RBP25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 IFIT1BQ5T764 474 aaKnown RBP25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 AGBL1Q96MI9 1066 aa25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 RANBP17Q9H2T7 1088 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms