RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 BLZF1Q9H2G9 400 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 LRP6O75581 1613 aa13.21□□□□□ -0.3
VTI1A-205ENST00000483122 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 A6NNZ2 444 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 ADORA1P30542 326 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 PTGISQ16647 500 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 NLRP14Q86W24 1093 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 APPBP2Q92624 585 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 GSDMAQ96QA5 445 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 CCT8L2Q96SF2 557 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 DNAJC7Q99615 494 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 EHD2Q9NZN4 543 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 LRP10Q7Z4F1 713 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 KIRREL3Q8IZU9 778 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 AATFQ9NY61 560 aaKnown RBP eCLIP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
VTI1A-205ENST00000483122 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
VTI1A-205ENST00000483122 ANO9A1A5B4 782 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 KRT83P78385 493 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 SPRED3Q2MJR0 410 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF233A6NK53 670 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 PPP1R37O75864 691 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 ZAP70P43403 619 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 PPARDQ03181 441 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 SPAG1Q07617 926 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 PLCB4Q15147 1175 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 EMBQ6PCB8 327 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 NELFBQ8WX92 580 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 CAVIN3Q969G5 261 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 FOXP1Q9H334 677 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-205ENST00000483122 RWDD2AQ9UIY3 292 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
VTI1A-205ENST00000483122 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
VTI1A-205ENST00000483122 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-205ENST00000483122 PAK1Q13153 545 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 SNCBQ16143 134 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 C6orf89Q6UWU4 347 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 CCDC114Q96M63 670 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 PURBQ96QR8 312 aaKnown RBP13.18□□□□□ -0.3
VTI1A-205ENST00000483122 PSMB7Q99436 277 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 XDHP47989 1333 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 EYA2O00167 538 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 NR1D1P20393 614 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 CDR1P51861 262 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 E2F5Q15329 346 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
VTI1A-205ENST00000483122 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 STIM2Q9P246 746 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 FAM153AQ9UHL3 310 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 TPX2Q9ULW0 747 aaKnown RBP13.18□□□□□ -0.3
VTI1A-205ENST00000483122 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
VTI1A-205ENST00000483122 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 IFNAR1P17181 557 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CLNS1AP54105 237 aaKnown RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CRYMQ14894 314 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CYB5D1Q6P9G0 228 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF572Q7Z3I7 529 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms