RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 KCTD2Q14681 263 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
HMGN1-213ENST00000482192 UBE2Q1Q7Z7E8 422 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 ESR2Q92731 530 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 MMP19Q99542 508 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.16
HMGN1-213ENST00000482192 NEDD4P46934 1319 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 TMEM232C9JQI7 657 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 FDX1P10109 184 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.17
HMGN1-213ENST00000482192 MCCP23508 829 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 OAZ1P54368 228 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 IKQ13123 557 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-213ENST00000482192 OLFML2BQ68BL8 750 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 SNRNP48Q6IEG0 339 aaKnown RBP14.02□□□□□ -0.17
HMGN1-213ENST00000482192 CENPQQ7L2Z9 268 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-213ENST00000482192 FAM160B2Q86V87 743 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 ANKLE1Q8NAG6 615 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 CHURC1Q8WUH1 139 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 SLC38A10Q9HBR0 1119 aa14.02□□□□□ -0.17
HMGN1-213ENST00000482192 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 COBLO75128 1261 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 IGHA2P01877 340 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 CHMLP26374 656 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-213ENST00000482192 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 TTC14Q96N46 770 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 HTATIP2Q9BUP3 242 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 IL25Q9H293 177 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 CENPFP49454 3210 aa14.01□□□□□ -0.17
HMGN1-213ENST00000482192 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
HMGN1-213ENST00000482192 COL11A1P12107 1806 aaPredicted RBP14□□□□□ -0.17
HMGN1-213ENST00000482192 PLA2G6O60733 806 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 CYP2C19P33261 490 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 KCTD1Q719H9 257 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 CHMP4CQ96CF2 233 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 MAML3Q96JK9 1138 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
HMGN1-213ENST00000482192 OGDHLQ9ULD0 1010 aa14□□□□□ -0.17
HMGN1-213ENST00000482192 MSCO60682 206 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 KDM4AO75164 1064 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 PGK2P07205 417 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 CCDC96Q2M329 555 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 IQCA1Q86XH1 822 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 MTMR7Q9Y216 660 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 DIS3Q9Y2L1 958 aaKnown RBP13.99□□□□□ -0.17
HMGN1-213ENST00000482192 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
HMGN1-213ENST00000482192 B4E1Z4 1266 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 SGSM2O43147 1006 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 CYBAP13498 195 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 CNGA1P29973 690 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 LHX8Q68G74 356 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 RASGRP2Q7LDG7 609 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 CHST13Q8NET6 341 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 KRT23Q9C075 422 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
HMGN1-213ENST00000482192 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
HMGN1-213ENST00000482192 BRCA2P51587 3418 aa13.97□□□□□ -0.17
HMGN1-213ENST00000482192 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 PDHBP11177 359 aa13.97□□□□□ -0.17
HMGN1-213ENST00000482192 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
HMGN1-213ENST00000482192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 DPF3Q92784 378 aa13.97□□□□□ -0.17
HMGN1-213ENST00000482192 PAWRQ96IZ0 340 aaKnown RBP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
HMGN1-213ENST00000482192 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-213ENST00000482192 ZNF536O15090 1300 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-213ENST00000482192 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 PTH1RQ03431 593 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
HMGN1-213ENST00000482192 TRPV1Q8NER1 839 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 TINF2Q9BSI4 451 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 UBAC1Q9BSL1 405 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 ACAD9Q9H845 621 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 HOMER2Q9NSB8 354 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 ZSWIM5Q9P217 1185 aa13.96□□□□□ -0.17
HMGN1-213ENST00000482192 TNKSO95271 1327 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 SEPT4O43236 478 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 ICAM1P05362 532 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms