RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	FOCAD	Q5VW36	1801 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	MOXD2P	A6NHM9	499 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	HOXA2	O43364	376 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	IGHA2	P01877	340 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	RLBP1	P12271	317 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	GUCY1A2	P33402	732 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	GUCA2A	Q02747	115 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	GABPA	Q06546	454 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	GRB14	Q14449	540 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	CEP85	Q6P2H3	762 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096		Q7L0L9	218 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	ITPRIP	Q8IWB1	547 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	PRR14	Q9BWN1	585 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	MTMR10	Q9NXD2	777 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	DDX20	Q9UHI6	824 aa	Known RBP	10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	IVNS1ABP	Q9Y6Y0	642 aa		10.43	□□□□□ -0.74
UBE2F-222	ENST00000482096	CDK5RAP2	Q96SN8	1893 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	MSC	O60682	206 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	POLR3D	P05423	398 aa	Predicted RBP	10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	NDUFV2	P19404	249 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	ATP2B2	Q01814	1243 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	WDR78	Q5VTH9	848 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	ERC1	Q8IUD2	1116 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	NPLOC4	Q8TAT6	608 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	LPAR1	Q92633	364 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	POLR3E	Q9NVU0	708 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	STXBP5L	Q9Y2K9	1186 aa		10.42	□□□□□ -0.74
UBE2F-222	ENST00000482096	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	MAGEB6P1	A0A0J9YX57	407 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096		A0A1W2PRG0	241 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	CYP2C19	P33261	490 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	USP46	P62068	366 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	COG2	Q14746	738 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	SEPT2	Q15019	361 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	TTF1	Q15361	905 aa	Predicted RBP	10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	TMEM132A	Q24JP5	1023 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	AACS	Q86V21	672 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	HOXC10	Q9NYD6	342 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	EXOC6B	Q9Y2D4	811 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	PCDHB3	Q9Y5E6	796 aa		10.41	□□□□□ -0.74
UBE2F-222	ENST00000482096	DNM1L	O00429	736 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	STRN	O43815	780 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	CYBA	P13498	195 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	PDE6A	P16499	860 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	CNGA1	P29973	690 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	HSP90AB4P	Q58FF6	505 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	SLC9C2	Q5TAH2	1124 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	OLFML2B	Q68BL8	750 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	NYAP1	Q6ZVC0	841 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	DPP9	Q86TI2	863 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	SHCBP1	Q8NEM2	672 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	TRPV1	Q8NER1	839 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	RHPN1	Q8TCX5	695 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	MCM9	Q9NXL9	1143 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	HCST	Q9UBK5	93 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	MYH1	P12882	1939 aa		10.4	□□□□□ -0.74
UBE2F-222	ENST00000482096	COL6A3	P12111	3177 aa		10.4	□□□□□ -0.75
UBE2F-222	ENST00000482096	MPHOSPH10	O00566	681 aa	Known RBP	10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	ADORA2A	P29274	412 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	COPS2	P61201	443 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	BLOC1S3	Q6QNY0	202 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	MB21D1	Q8N884	522 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	ARRDC4	Q8NCT1	418 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	SPATC1L	Q9H0A9	340 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	IL1RAPL2	Q9NP60	686 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	LIMD1	Q9UGP4	676 aa		10.39	□□□□□ -0.75
UBE2F-222	ENST00000482096	ZNF532	Q9HCE3	1301 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	TCRBV5S4A2T	A0A5A2	114 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	COBL	O75128	1261 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	ERCC3	P19447	782 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	CLK2	P49760	499 aa	Known RBP	10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	RTP1	P59025	263 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	CSPP1	Q1MSJ5	1256 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	KIAA1755	Q5JYT7	1200 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	TMEM179	Q6ZVK1	233 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	SIAH1	Q8IUQ4	282 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	ABRA	Q8N0Z2	381 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	CLASRP	Q8N2M8	674 aa	Known RBP	10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	SDR42E1	Q8WUS8	393 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	TANGO6	Q9C0B7	1094 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	SWAP70	Q9UH65	585 aa		10.38	□□□□□ -0.75
UBE2F-222	ENST00000482096	GOLIM4	O00461	696 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	SEPT4	O43236	478 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	FDX1	P10109	184 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	CYP2D6	P10635	497 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	SKIV2L	Q15477	1246 aa	Known RBP	10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	GJC2	Q5T442	439 aa	Predicted RBP	10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	SLC39A5	Q6ZMH5	540 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	LCORL	Q8N3X6	602 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	SLC44A5	Q8NCS7	719 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	KIF1BP	Q96EK5	621 aa		10.37	□□□□□ -0.75
UBE2F-222	ENST00000482096	MROH8	Q9H579	483 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms