RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CDK5RAP2Q96SN8 1893 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 CA3P07451 260 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 FCER1AP12319 257 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 CDK7P50613 346 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 PLCD1P51178 756 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 CERKLQ49MI3 558 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 TTC6Q86TZ1 520 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 FAM126BQ8IXS8 530 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 ABRAQ8N0Z2 381 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 KLHDC9Q8NEP7 349 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 RIOK1Q9BRS2 568 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 NRBP1Q9UHY1 535 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 FOCADQ5VW36 1801 aa11.43□□□□□ -0.58
SMARCE1-210ENST00000481231 ZBBXA8MT70 800 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 CCL23P55773 120 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 EVX2Q03828 476 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 COG2Q14746 738 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 TMED8Q6PL24 325 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 ERC1Q8IUD2 1116 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 ANKS1AQ92625 1134 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 ATG4CQ96DT6 458 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 GLT1D1Q96MS3 346 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 PHOX2BQ99453 314 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 MROH8Q9H579 483 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 PCDHA11Q9Y5I1 949 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-210ENST00000481231 ELP1O95163 1332 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 A0A1W2PRG0 241 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ARVCFO00192 962 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ADCY6O43306 1168 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ASGR1P07306 291 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 PDE6AP16499 860 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ATP2A2P16615 1042 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 GABPAQ06546 454 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 SEPT2Q15019 361 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 PANK1Q8TE04 598 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 ARNTL2Q8WYA1 636 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 MMP19Q99542 508 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 HIPK3Q9H422 1215 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 IL1RAPL2Q9NP60 686 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 CNPY2Q9Y2B0 182 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 SMCHD1A6NHR9 2005 aa11.41□□□□□ -0.58
SMARCE1-210ENST00000481231 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 C6orf222P0C671 652 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 SLC9C2Q5TAH2 1124 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 SPRED2Q7Z698 418 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 RHPN1Q8TCX5 695 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 WNT8AQ9H1J5 351 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 MCM9Q9NXL9 1143 aa11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-210ENST00000481231 GOLIM4O00461 696 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 TLR3O15455 904 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 FLOT1O75955 427 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 CD4P01730 458 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 CYP2D6P10635 497 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 DSG3P32926 999 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 TMEM132BQ14DG7 1078 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 GJD3Q8N144 294 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 MB21D1Q8N884 522 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 VWCEQ96DN2 955 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 FAM184BQ9ULE4 1060 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 MYH1P12882 1939 aa11.39□□□□□ -0.59
SMARCE1-210ENST00000481231 ZNF532Q9HCE3 1301 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 TCRBV5S4A2TA0A5A2 114 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 CST5P28325 142 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 GRB10Q13322 594 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 TTLL4Q14679 1199 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 KCTD2Q14681 263 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 CLEC10AQ8IUN9 316 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 LCORLQ8N3X6 602 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 SDR42E1Q8WUS8 393 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 SCLYQ96I15 445 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 USP34Q70CQ2 3546 aa11.38□□□□□ -0.59
SMARCE1-210ENST00000481231 DUSP11O75319 330 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 SNAI1O95863 264 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms