RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 COL5A2P05997 1499 aaPredicted RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 BCL9LQ86UU0 1499 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 GOLGA8KD6RF30 607 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 KINO60870 393 aaKnown RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 CUTAO60888 179 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 RASSF9O75901 435 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 ADAMTS2O95450 1211 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 FESP07332 822 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 EPB41P11171 864 aaKnown RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 ATP5JP18859 108 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 SCP2P22307 547 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 GJB2P29033 226 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 PSEN2P49810 448 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 MTHFSP49914 203 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 APBA1Q02410 837 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 NFE2L2Q16236 605 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 RNF187Q5TA31 235 aaPredicted RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 TLDC1Q6P9B6 456 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 ARMC9Q7Z3E5 817 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 DHX40Q8IX18 779 aaKnown RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 RPUSD2Q8IZ73 545 aaKnown RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 FAM76AQ8TAV0 307 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 ZFAND2BQ8WV99 257 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 IP6K1Q92551 441 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
PKP4-211ENST00000481115 BORCS6Q96GS4 357 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 CCDC34Q96HJ3 373 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 STIM2Q9P246 746 aa8.07□□□□□ -1.12
PKP4-211ENST00000481115 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 CDHR2Q9BYE9 1310 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 NPHP1O15259 732 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 EIF3HO15372 352 aaKnown RBP eCLIP8.06□□□□□ -1.12
PKP4-211ENST00000481115 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 HOXC9P31274 260 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 MMP16P51512 607 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 IRAK1P51617 712 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
PKP4-211ENST00000481115 TMED1Q13445 227 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 ZNF394Q53GI3 561 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 CEP85LQ5SZL2 805 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 NAIF1Q69YI7 327 aaPredicted RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 ARMCX5Q6P1M9 558 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 UBE3BQ7Z3V4 1068 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 FBF1Q8TES7 1133 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 TSR2Q969E8 191 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 CCDC47Q96A33 483 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 JAKMIP1Q96N16 626 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 MMTAG2Q9BU76 263 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 UPF3BQ9BZI7 483 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 BICC1Q9H694 974 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 AXIN2Q9Y2T1 843 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 RRP7AQ9Y3A4 280 aaKnown RBP8.06□□□□□ -1.12
PKP4-211ENST00000481115 USP16Q9Y5T5 823 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 AK5Q9Y6K8 562 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 CEMIPQ8WUJ3 1361 aa8.06□□□□□ -1.12
PKP4-211ENST00000481115 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 A0A1W2PQD8 194 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 ERICH2A1L162 156 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 VWA3AA6NCI4 1184 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 OPA1O60313 960 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 CDKL5O76039 1030 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 RTN3O95197 1032 aaPredicted RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 FGRP09769 529 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 PSMA5P28066 241 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 LIG3P49916 1009 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 PTPN12Q05209 780 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 ACTN3Q08043 901 aaPredicted RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 RIPK1Q13546 671 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 SNCBQ16143 134 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 CDC37Q16543 378 aaPredicted RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 MEX3CQ5U5Q3 659 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 OR8K1Q8NGG5 319 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 MIPOL1Q8TD10 442 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 RUFY2Q8WXA3 655 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 ZFRQ96KR1 1074 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 SH3GL2Q99962 352 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 CRACR2AQ9BSW2 395 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 ANKZF1Q9H8Y5 726 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 DMGDHQ9UI17 866 aaKnown RBP8.05□□□□□ -1.12
PKP4-211ENST00000481115 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
PKP4-211ENST00000481115 CORO1CQ9ULV4 474 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms