RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TINF2Q9BSI4 451 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 MTMR4Q9NYA4 1195 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 ATP11BQ9Y2G3 1177 aa18.14■□□□□ 0.49
LIMS3-203ENST00000480744 TFAP4Q01664 338 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 NEDD1Q8NHV4 660 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 DDX11Q96FC9 970 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
LIMS3-203ENST00000480744 PRKAG2Q9UGJ0 569 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 RIPK3Q9Y572 518 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 LTBP2Q14767 1821 aa18.13■□□□□ 0.49
LIMS3-203ENST00000480744 RARBP10826 455 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 CTDSPL2Q05D32 466 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 LRRC41Q15345 812 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 MKL1Q969V6 931 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 RAVER2Q9HCJ3 691 aaKnown RBP18.12■□□□□ 0.49
LIMS3-203ENST00000480744 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 CNPY2Q9Y2B0 182 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
LIMS3-203ENST00000480744 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
LIMS3-203ENST00000480744 BMP3P12645 472 aa18.11■□□□□ 0.49
LIMS3-203ENST00000480744 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
LIMS3-203ENST00000480744 ADCYAP1R1P41586 468 aa18.11■□□□□ 0.49
LIMS3-203ENST00000480744 SLC39A5Q6ZMH5 540 aa18.11■□□□□ 0.49
LIMS3-203ENST00000480744 GMCL1P1Q8NEA9 526 aa18.11■□□□□ 0.49
LIMS3-203ENST00000480744 NRBP1Q9UHY1 535 aa18.11■□□□□ 0.49
LIMS3-203ENST00000480744 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
LIMS3-203ENST00000480744 EVI5LQ96CN4 794 aa18.1■□□□□ 0.49
LIMS3-203ENST00000480744 SLC38A10Q9HBR0 1119 aa18.1■□□□□ 0.49
LIMS3-203ENST00000480744 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
LIMS3-203ENST00000480744 SYNPO2Q9UMS6 1093 aa18.1■□□□□ 0.49
LIMS3-203ENST00000480744 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 TMEM232C9JQI7 657 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 PGK1P00558 417 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 AKR1A1P14550 325 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 PDE1AP54750 535 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
LIMS3-203ENST00000480744 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 ANKRD35Q8N283 1001 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 LENG1Q96BZ8 264 aaPredicted RBP18.09■□□□□ 0.49
LIMS3-203ENST00000480744 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 HOMER2Q9NSB8 354 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 ZHX1Q9UKY1 873 aaPredicted RBP18.09■□□□□ 0.49
LIMS3-203ENST00000480744 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
LIMS3-203ENST00000480744 LAMA3Q16787 3333 aa18.08■□□□□ 0.49
LIMS3-203ENST00000480744 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 FOXP2O15409 715 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 ZNF865P0CJ78 1059 aaPredicted RBP18.08■□□□□ 0.48
LIMS3-203ENST00000480744 SLC1A4P43007 532 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 RNF180Q86T96 592 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 MTMR7Q9Y216 660 aa18.08■□□□□ 0.48
LIMS3-203ENST00000480744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.08■□□□□ 0.48
LIMS3-203ENST00000480744 RANBP6O60518 1105 aaKnown RBP18.07■□□□□ 0.48
LIMS3-203ENST00000480744 NMT2O60551 498 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 MCCP23508 829 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 STAT2P52630 851 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 HELLSQ9NRZ9 838 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 TOMM22Q9NS69 142 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 FBXO40Q9UH90 709 aa18.07■□□□□ 0.48
LIMS3-203ENST00000480744 SYNGAP1Q96PV0 1343 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 DNAJC25-GNG10A0A024R161 153 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 SNAI1O95863 264 aaPredicted RBP18.06■□□□□ 0.48
LIMS3-203ENST00000480744 OAZ1P54368 228 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 KCTD1Q719H9 257 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 Q7L0L9 218 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 FAM160B2Q86V87 743 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 MSL3Q8N5Y2 521 aaKnown RBP18.06■□□□□ 0.48
LIMS3-203ENST00000480744 DEFB123Q8N688 67 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 CHST13Q8NET6 341 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 GMCL1Q96IK5 515 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 FAM184BQ9ULE4 1060 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 PHF24Q9UPV7 400 aa18.06■□□□□ 0.48
LIMS3-203ENST00000480744 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 SNX17Q15036 470 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 STAG1Q8WVM7 1258 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 IL17RBQ9NRM6 502 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 TACC3Q9Y6A5 838 aa18.05■□□□□ 0.48
LIMS3-203ENST00000480744 A0A1W2PQ45 241 aaPredicted RBP18.04■□□□□ 0.48
LIMS3-203ENST00000480744 A0A1W2PQY0 241 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 FDX1P10109 184 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 SNAP25P60880 206 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 TLE2Q04725 743 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 NMIQ13287 307 aaPredicted RBP18.04■□□□□ 0.48
LIMS3-203ENST00000480744 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 RRP12Q5JTH9 1297 aaKnown RBP18.04■□□□□ 0.48
LIMS3-203ENST00000480744 GPR153Q6NV75 609 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 CCDC174Q6PII3 467 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms