RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 AIFM3Q96NN9 605 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 RPAP3Q9H6T3 665 aaPredicted RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 GJB4Q9NTQ9 266 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 GINM1Q9NU53 330 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 SMC3Q9UQE7 1217 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 ATAD5Q96QE3 1844 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 OTOFQ9HC10 1997 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 CYTH3O43739 400 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 FLOT1O75955 427 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 USP14P54578 494 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 FSTL1Q12841 308 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 CUL4AQ13619 759 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 NTRK3Q16288 839 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 SLC35G1Q2M3R5 365 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 CPLX2Q6PUV4 134 aaKnown RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 TMTC3Q6ZXV5 915 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 NSUN7Q8NE18 718 aaKnown RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 WNK4Q96J92 1243 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 RBM28Q9NW13 759 aaKnown RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 DOCK1Q14185 1865 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 GREB1LQ9C091 1923 aaPredicted RBP7.45□□□□□ -1.22
HERC4-210ENST00000480158 C19orf81C9J6K1 198 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 PEX10O60683 326 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 PPP1R37O75864 691 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 SNHG28P0DPA3 235 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 TAL1P17542 331 aaPredicted RBP7.45□□□□□ -1.22
HERC4-210ENST00000480158 STAT2P52630 851 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 AKAP17AQ02040 695 aaKnown RBP7.45□□□□□ -1.22
HERC4-210ENST00000480158 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
HERC4-210ENST00000480158 PPIL2Q13356 520 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 ASPRV1Q53RT3 343 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 SPRYD7Q5W111 196 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 RGMBQ6NW40 437 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 ADGRF4Q8IZF3 695 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 FAM184AQ8NB25 1140 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 DCAF4Q8WV16 495 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 GMCL1Q96IK5 515 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 PIGSQ96S52 555 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 ORC3Q9UBD5 711 aaPredicted RBP7.45□□□□□ -1.22
HERC4-210ENST00000480158 TLL2Q9Y6L7 1015 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 MYH4Q9Y623 1939 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 PAPPA2Q9BXP8 1791 aa7.45□□□□□ -1.22
HERC4-210ENST00000480158 FDPSP14324 419 aaKnown RBP7.44□□□□□ -1.22
HERC4-210ENST00000480158 GUCY1B3Q02153 619 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 FUT2Q10981 343 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 SNAPC2Q13487 334 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 GPATCH4Q5T3I0 446 aaKnown RBP7.44□□□□□ -1.22
HERC4-210ENST00000480158 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 LPAR1Q92633 364 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 GPKOWQ92917 476 aaPredicted RBP eCLIP7.44□□□□□ -1.22
HERC4-210ENST00000480158 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 CCL15-CCL14A0A0B4J2E2 113 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
HERC4-210ENST00000480158 CXCL11O14625 94 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 WDR46O15213 610 aaKnown RBP7.44□□□□□ -1.22
HERC4-210ENST00000480158 CDKL5O76039 1030 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 IFNAR1P17181 557 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 GNAQP50148 359 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 APLP1P51693 650 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 CCL15Q16663 113 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 PRRT2Q7Z6L0 340 aaPredicted RBP7.44□□□□□ -1.22
HERC4-210ENST00000480158 RASAL3Q86YV0 1011 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 CPXCR1Q8N123 301 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 JMJD4Q9H9V9 463 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 PRR12Q9ULL5 1215 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 CNTNAP5Q8WYK1 1306 aa7.44□□□□□ -1.22
HERC4-210ENST00000480158 FMNL1O95466 1100 aaPredicted RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 CYP2C8P10632 490 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 GTF2A2P52657 109 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 RCAN1P53805 252 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 PKP1Q13835 747 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 PPP2R5BQ15173 497 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 USH1GQ495M9 461 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 SYDE2Q5VT97 1194 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 HEATR3Q7Z4Q2 680 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 RRP36Q96EU6 259 aaKnown RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 MS4A4AQ96JQ5 239 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 MAP3K14Q99558 947 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 SEC63Q9UGP8 760 aaKnown RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 KCNH4Q9UQ05 1017 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 VPS37CA5D8V6 355 aaPredicted RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 AOC2O75106 756 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 CETPP11597 493 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 CDC37Q16543 378 aaPredicted RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 DEFB115Q30KQ5 88 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 LARP1BQ659C4 914 aaKnown RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 PRPF38AQ8NAV1 312 aaKnown RBP7.43□□□□□ -1.22
HERC4-210ENST00000480158 SMARCC2Q8TAQ2 1214 aa7.43□□□□□ -1.22
HERC4-210ENST00000480158 CHURC1Q8WUH1 139 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms