RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 GDF15Q99988 308 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 SENP6Q9GZR1 1112 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-218ENST00000479554 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-218ENST00000479554 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
ATG4B-218ENST00000479554 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
ATG4B-218ENST00000479554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATG4B-218ENST00000479554 PLXNA1Q9UIW2 1896 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 LAMA3Q16787 3333 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
ATG4B-218ENST00000479554 TSPY2A6NKD2 308 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 KBTBD13C9JR72 458 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 BMP3P12645 472 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 ZNF792Q3KQV3 632 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 GJC2Q5T442 439 aaPredicted RBP17■□□□□ 0.31
ATG4B-218ENST00000479554 VPS53Q5VIR6 699 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 CPXCR1Q8N123 301 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 ARRDC4Q8NCT1 418 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 NRBP1Q9UHY1 535 aa17■□□□□ 0.31
ATG4B-218ENST00000479554 A0A0D9SFI3 127 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-218ENST00000479554 BMP8BP34820 402 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 MAGEA10P43363 369 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-218ENST00000479554 SLC4A3P48751 1232 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 TICAM2Q86XR7 235 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 TINF2Q9BSI4 451 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 RIPK3Q9Y572 518 aa16.99■□□□□ 0.31
ATG4B-218ENST00000479554 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-218ENST00000479554 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-218ENST00000479554 ALX1Q15699 326 aa16.98■□□□□ 0.31
ATG4B-218ENST00000479554 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
ATG4B-218ENST00000479554 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
ATG4B-218ENST00000479554 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
ATG4B-218ENST00000479554 RAVER2Q9HCJ3 691 aaKnown RBP16.98■□□□□ 0.31
ATG4B-218ENST00000479554 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 RANBP6O60518 1105 aaKnown RBP16.97■□□□□ 0.31
ATG4B-218ENST00000479554 FDX1P10109 184 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 SLC1A4P43007 532 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 STAT2P52630 851 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 OAZ1P54368 228 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-218ENST00000479554 FAM160B2Q86V87 743 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
ATG4B-218ENST00000479554 ORC4O43929 436 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 NMT2O60551 498 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 RARBP10826 455 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 RTP1P59025 263 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 LRRC41Q15345 812 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG4B-218ENST00000479554 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
ATG4B-218ENST00000479554 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 CHURC1Q8WUH1 139 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 TOMM22Q9NS69 142 aa16.96■□□□□ 0.31
ATG4B-218ENST00000479554 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.3
ATG4B-218ENST00000479554 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.3
ATG4B-218ENST00000479554 DNAJC25-GNG10A0A024R161 153 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 FGAP02671 866 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 HSPD1P10809 573 aaKnown RBP16.95■□□□□ 0.3
ATG4B-218ENST00000479554 AKR1A1P14550 325 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-218ENST00000479554 MCCP23508 829 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-218ENST00000479554 ANKRD35Q8N283 1001 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 UBE2OQ9C0C9 1292 aaKnown RBP16.95■□□□□ 0.3
ATG4B-218ENST00000479554 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 ATP11BQ9Y2G3 1177 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
ATG4B-218ENST00000479554 SOX1O00570 391 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-218ENST00000479554 IGHDP01880 384 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-218ENST00000479554 NUCB1Q02818 461 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
ATG4B-218ENST00000479554 KCTD1Q719H9 257 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 ZNF467Q7Z7K2 595 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-218ENST00000479554 TDHQ8IZJ6 230 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 HOMER2Q9NSB8 354 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 MTMR7Q9Y216 660 aa16.94■□□□□ 0.3
ATG4B-218ENST00000479554 PLA2G6O60733 806 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 FGRP09769 529 aa16.93■□□□□ 0.3
ATG4B-218ENST00000479554 ADCYAP1R1P41586 468 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms