RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 PDE1AP54750 535 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 MDM2Q00987 491 aaPredicted RBP26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 TFAP4Q01664 338 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 CTDSPL2Q05D32 466 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 PDE4BQ07343 736 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 HDAC1Q13547 482 aaPredicted RBP26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 GMCL1P1Q8NEA9 526 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 KIFC2Q96AC6 838 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 LCTP09848 1927 aa26.09■■□□□ 1.77
MCF2L2-210ENST00000478652 SLC4A3P48751 1232 aa26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 RTP1P59025 263 aa26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 ARRDC4Q8NCT1 418 aa26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 UBE2OQ9C0C9 1292 aaKnown RBP26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 RAVER2Q9HCJ3 691 aaKnown RBP26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 DIS3Q9Y2L1 958 aaKnown RBP26.08■■□□□ 1.77
MCF2L2-210ENST00000478652 KBTBD13C9JR72 458 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 LRRC41Q15345 812 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 SLFN13Q68D06 897 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 TDHQ8IZJ6 230 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 LENG1Q96BZ8 264 aaPredicted RBP26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 CHMP4CQ96CF2 233 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 SLC38A10Q9HBR0 1119 aa26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 ZBTB47Q9UFB7 747 aaPredicted RBP26.07■■□□□ 1.76
MCF2L2-210ENST00000478652 LRRC37A2A6NM11 1700 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 ATP2A1O14983 1001 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 SLC3A2P08195 630 aaKnown RBP26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 RASGRP2Q7LDG7 609 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 EVI5LQ96CN4 794 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 FEM1BQ9UK73 627 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 SYNPO2Q9UMS6 1093 aa26.06■■□□□ 1.76
MCF2L2-210ENST00000478652 DNAJC25-GNG10A0A024R161 153 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 NMT2O60551 498 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 ZNF865P0CJ78 1059 aaPredicted RBP26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 SLC39A5Q6ZMH5 540 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 FERMT2Q96AC1 680 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 FAM227BQ96M60 508 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 NRBP1Q9UHY1 535 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 ATP11BQ9Y2G3 1177 aa26.05■■□□□ 1.76
MCF2L2-210ENST00000478652 LAMA4Q16363 1823 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 A0A0D9SFI3 127 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 ZBED4O75132 1171 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 BMP3P12645 472 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 ADCYAP1R1P41586 468 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 LNPKQ9C0E8 428 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 XPNPEP3Q9NQH7 507 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 IL17RBQ9NRM6 502 aa26.04■■□□□ 1.76
MCF2L2-210ENST00000478652 PGK1P00558 417 aa26.03■■□□□ 1.76
MCF2L2-210ENST00000478652 DDX11Q96FC9 970 aa26.03■■□□□ 1.76
MCF2L2-210ENST00000478652 FGD4Q96M96 766 aa26.03■■□□□ 1.76
MCF2L2-210ENST00000478652 TMEM232C9JQI7 657 aa26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 SNAI1O95863 264 aaPredicted RBP26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 RARBP10826 455 aa26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 SNX17Q15036 470 aa26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 LRIT3Q3SXY7 679 aa26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 TRIM60Q495X7 471 aa26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 ISY1Q9ULR0 285 aaKnown RBP26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 CTDP1Q9Y5B0 961 aaPredicted RBP26.02■■□□□ 1.76
MCF2L2-210ENST00000478652 TSPY2A6NKD2 308 aa26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 GMCL1Q96IK5 515 aa26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 HELLSQ9NRZ9 838 aa26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 ANAPC4Q9UJX5 808 aa26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 STX8Q9UNK0 236 aa26.01■■□□□ 1.75
MCF2L2-210ENST00000478652 ZNF536O15090 1300 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 AKR1A1P14550 325 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 MCCP23508 829 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 STAT2P52630 851 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 OAZ1P54368 228 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 ZNF589Q86UQ0 364 aaPredicted RBP26■■□□□ 1.75
MCF2L2-210ENST00000478652 HOMER2Q9NSB8 354 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 PHF24Q9UPV7 400 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 CNPY2Q9Y2B0 182 aa26■■□□□ 1.75
MCF2L2-210ENST00000478652 SYNGAP1Q96PV0 1343 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 ADAMTS4O75173 837 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 SLC1A4P43007 532 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 NMIQ13287 307 aaPredicted RBP25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 MAMDC4Q6UXC1 1216 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 KCTD1Q719H9 257 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 SMC5Q8IY18 1101 aa25.99■■□□□ 1.75
MCF2L2-210ENST00000478652 ADCY6O43306 1168 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 RANBP6O60518 1105 aaKnown RBP25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 ALX1Q15699 326 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 B4GALNT3Q6L9W6 998 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 Q7L0L9 218 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 SH3RF1Q7Z6J0 888 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 ANKRD35Q8N283 1001 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 MSL3Q8N5Y2 521 aaKnown RBP25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 CHST13Q8NET6 341 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 LBHD1Q9BQE6 289 aaPredicted RBP25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 PRDM5Q9NQX1 630 aaPredicted RBP25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 PDLIM7Q9NR12 457 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 ZHX1Q9UKY1 873 aaPredicted RBP25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 MTMR7Q9Y216 660 aa25.98■■□□□ 1.75
MCF2L2-210ENST00000478652 SYNRGQ9UMZ2 1314 aa25.97■■□□□ 1.75
MCF2L2-210ENST00000478652 ORC4O43929 436 aa25.97■■□□□ 1.75
MCF2L2-210ENST00000478652 FGAP02671 866 aa25.97■■□□□ 1.75
MCF2L2-210ENST00000478652 FGRP09769 529 aa25.97■■□□□ 1.75
MCF2L2-210ENST00000478652 SNAP25P60880 206 aa25.97■■□□□ 1.75
MCF2L2-210ENST00000478652 IRX5P78411 483 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms